ENSDARG00000058044


Danio rerio

Features
Gene ID: ENSDARG00000058044
  
Biological name :rab1ba
  
Synonyms : rab1ba / zRAB1B, member RAS oncogene family a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 18100996
Gene end: 18116392
  
Corresponding Affymetrix probe sets: Dr.24200.1.S1_at (Zebrafish Array)   NM_201142_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000055809
Ensembl peptide - ENSDARP00000152986
NCBI entrez gene - 394117     See in Manteia.
RefSeq - NM_201142
RefSeq Peptide - NP_957436
swissprot - Q7ZUV5
ZFIN ID - ZDB-GENE-040426-873
Ensembl - ENSDARG00000058044
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab1ab / RAB1A, member RAS oncogene family b / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A * / RAB1A, member RAS oncogene family*ENSDARG0000002966395
rab1bb / RAB1B, member RAS oncogene family bENSDARG0000005647994
rab1aa / RAB1A, member RAS oncogene family aENSDARG0000005226394
zgc:171927 / RAB1B* / Q9D1G1* / Q9H0U4* / RAB1B, member RAS oncogene family*ENSDARG0000003305678
si:dkey-16l2.16ENSDARG0000003796753
rab35b / RAB35, member RAS oncogene family b / RAB35* / Q6PHN9* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000005842553
CABZ01072548.1 / RAB35* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000010207852
rab30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSDARG0000003788445
rab43 / RAB43, member RAS oncogene family / Q86YS6* / Q8CG50*ENSDARG0000005940444
rab33ba / RAB33B, member RAS oncogene family a / RAB33B* / O35963* / Q9H082* / RAB33B, member RAS oncogene family*ENSDARG0000005229041
zgc:101559ENSDARG0000000325740
RAB19 (1 of many) / RAB19, member RAS oncogene family / RAB19* / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSDARG0000010115040
rab40b / RAB40B, member RAS oncogene family / Q12829* / RAB40A* / Q8WXH6* / P0C0E4* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family*ENSDARG0000004241039
rab33a / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSDARG0000005739439
rab40c / RAB40c, member RAS oncogene family / Q8VHQ4* / Q96S21*ENSDARG0000006120839
CABZ01072885.1 / RAB26* / Q9ULW5* / RAB26, member RAS oncogene family*ENSDARG0000010425933


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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