ENSGALG00000003381


Gallus gallus

Features
Gene ID: ENSGALG00000003381
  
Biological name :HERC1
  
Synonyms : HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 / HERC1
  
Possible biological names infered from orthology : Q15751
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 3890206
Gene end: 3967151
  
Corresponding Affymetrix probe sets: Gga.15141.1.S1_s_at (Chicken Array)   GgaAffx.2104.1.S1_s_at (Chicken Array)   GgaAffx.2104.2.S1_s_at (Chicken Array)   GgaAffx.2105.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005334
NCBI entrez gene - 415367     See in Manteia.
RefSeq - XM_015278928
RefSeq - XM_015278929
RefSeq - XM_015278930
RefSeq - XM_015278931
RefSeq - XM_015278932
RefSeq - XM_015278933
RefSeq - XM_413753
RefSeq - XM_004943732
swissprot - E1C4H7
Ensembl - ENSGALG00000003381
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 herc1ENSDARG00000077901Danio rerio
 HERC1ENSG00000103657Homo sapiens
 Herc1ENSMUSG00000038664Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HERC2 / HECT and RLD domain containing E3 ubiquitin protein ligase 2 / O95714* / Q4U2R1* / E3 ubiquitin-protein ligase HERC2 *ENSGALG0000001673924
HERC4 / HECT and RLD domain containing E3 ubiquitin protein ligase 4 / Q5GLZ8* / Q6PAV2* / Probable E3 ubiquitin-protein ligase HERC4 *ENSGALG000000038614
HERC5* / HERC6* / Q9UII4* / F2Z461* / Q8IVU3* / AC098582.1* / E3 ISG15--protein ligase Herc6 * / HECT and RLD domain containing E3 ubiquitin protein ligase 5* / HECT and RLD domain containi...ENSGALG000000420014
HERC3 / probable E3 ubiquitin-protein ligase HERC3 / Q15034* / HECT and RLD domain containing E3 ubiquitin protein ligase 3*ENSGALG000000103634
HECTD3* / Q3U487* / Q5T447* / E3 ubiquitin-protein ligase HECTD3 * / HECT domain E3 ubiquitin protein ligase 3*ENSGALG000000102173
HECTD3* / Q3U487* / Q5T447* / E3 ubiquitin-protein ligase HECTD3 * / HECT domain E3 ubiquitin protein ligase 3*ENSGALG000000102033
UBE3A / ubiquitin protein ligase E3A / O08759* / Q05086*ENSGALG000000349442
HECTD2 / HECT domain E3 ubiquitin protein ligase 2 / Q5U5R9* / Q8CDU6* / Probable E3 ubiquitin-protein ligase HECTD2 *ENSGALG000000380432
ENSGALG000000232371


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR000569  HECT domain
 IPR001680  WD40 repeat
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010507 negative regulation of autophagy IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0021702 cerebellar Purkinje cell differentiation IEA
 biological_processGO:0031175 neuron projection development IEA
 biological_processGO:0050885 neuromuscular process controlling balance IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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