ENSGALG00000003861


Gallus gallus

Features
Gene ID: ENSGALG00000003861
  
Biological name :HERC4
  
Synonyms : HECT and RLD domain containing E3 ubiquitin protein ligase 4 / HERC4
  
Possible biological names infered from orthology : Probable E3 ubiquitin-protein ligase HERC4 / Q5GLZ8 / Q6PAV2
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 10419368
Gene end: 10448686
  
Corresponding Affymetrix probe sets: Gga.14609.1.S1_at (Chicken Array)   Gga.17388.1.S1_at (Chicken Array)   GgaAffx.2409.1.S1_at (Chicken Array)   GgaAffx.26036.1.S1_s_at (Chicken Array)   GgaAffx.26036.6.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006125
Ensembl peptide - ENSGALP00000063932
Ensembl peptide - ENSGALP00000052951
Ensembl peptide - ENSGALP00000044133
NCBI entrez gene - 423683     See in Manteia.
RefSeq - XM_015278714
RefSeq - XM_015278711
RefSeq - XM_015278712
RefSeq - XM_015278713
swissprot - A0A1L1RYJ7
swissprot - A0A1D5PJF8
swissprot - A0A1D5NUW5
swissprot - F1NCH3
Ensembl - ENSGALG00000003861
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 herc4ENSDARG00000059936Danio rerio
 HERC4ENSG00000148634Homo sapiens
 Herc4ENSMUSG00000020064Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HERC3 / probable E3 ubiquitin-protein ligase HERC3 / Q15034* / HECT and RLD domain containing E3 ubiquitin protein ligase 3*ENSGALG0000001036355
HERC5* / HERC6* / Q9UII4* / F2Z461* / Q8IVU3* / AC098582.1* / E3 ISG15--protein ligase Herc6 * / HECT and RLD domain containing E3 ubiquitin protein ligase 5* / HECT and RLD domain containi...ENSGALG0000004200134
UBE3A / ubiquitin protein ligase E3A / O08759* / Q05086*ENSGALG0000003494421
HERC1 / HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 / Q15751*ENSGALG0000000338120
HECTD2 / HECT domain E3 ubiquitin protein ligase 2 / Q5U5R9* / Q8CDU6* / Probable E3 ubiquitin-protein ligase HECTD2 *ENSGALG0000003804320
HERC2 / HECT and RLD domain containing E3 ubiquitin protein ligase 2 / O95714* / Q4U2R1* / E3 ubiquitin-protein ligase HERC2 *ENSGALG0000001673920
HECTD3* / Q3U487* / Q5T447* / E3 ubiquitin-protein ligase HECTD3 * / HECT domain E3 ubiquitin protein ligase 3*ENSGALG0000001020313
HECTD3* / Q3U487* / Q5T447* / E3 ubiquitin-protein ligase HECTD3 * / HECT domain E3 ubiquitin protein ligase 3*ENSGALG0000001021713
ENSGALG000000232372


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR000569  HECT domain
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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