ENSGALG00000004198


Gallus gallus

Features
Gene ID: ENSGALG00000004198
  
Biological name :PDZD11
  
Synonyms : PDZD11 / PDZ domain-containing protein 11 / Q5ZIK2
  
Possible biological names infered from orthology : PDZ domain containing 11 / Q5EBL8 / Q9CZG9
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 1279956
Gene end: 1283267
  
Corresponding Affymetrix probe sets: GgaAffx.12885.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053060
Ensembl peptide - ENSGALP00000039853
NCBI entrez gene - 422153     See in Manteia.
RefSeq - XM_015278222
RefSeq - NM_001031111
RefSeq Peptide - NP_001026282
swissprot - Q5ZIK2
swissprot - A0A1D5PJR4
Ensembl - ENSGALG00000004198
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdzd11ENSDARG00000053194Danio rerio
 PDZD11ENSG00000120509Homo sapiens
 Pdzd11ENSMUSG00000015668Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDZD7 / PDZ domain containing 7 / Q9H5P4*ENSGALG0000002072631
USH1C / USH1 protein network component harmonin / Q9Y6N9*ENSGALG0000000619227
WHRN / whirlin / Q80VW5* / Q9P202*ENSGALG0000003822326


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007269 neurotransmitter secretion IBA
 biological_processGO:0045199 maintenance of epithelial cell apical/basal polarity IBA
 biological_processGO:1903361 protein localization to basolateral plasma membrane IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0005911 cell-cell junction IBA
 cellular_componentGO:0016323 basolateral plasma membrane ISS
 cellular_componentGO:0045202 synapse IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0008022 protein C-terminus binding ISS


Pathways (from Reactome)
Pathway description
Biotin transport and metabolism
Vitamin B5 (pantothenate) metabolism
Transport of vitamins, nucleosides, and related molecules
Ion influx/efflux at host-pathogen interface
Ion transport by P-type ATPases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000004176 ATOX1 / antioxidant 1 copper chaperone / O00244* / O08997* / Copper transport protein ATOX1 *  / reaction






 

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