ENSG00000120509


Homo sapiens

Features
Gene ID: ENSG00000120509
  
Biological name :PDZD11
  
Synonyms : PDZD11 / PDZ domain containing 11 / Q5EBL8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q13.1
Gene start: 70286595
Gene end: 70290514
  
Corresponding Affymetrix probe sets: 223037_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000239666
Ensembl peptide - ENSP00000363578
NCBI entrez gene - 51248     See in Manteia.
OMIM - 300632
RefSeq - XM_017029568
RefSeq - NM_016484
RefSeq - XM_011530973
RefSeq Peptide - NP_057568
swissprot - Q5EBL8
Ensembl - ENSG00000120509
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdzd11ENSDARG00000053194Danio rerio
 PDZD11ENSGALG00000004198Gallus gallus
 Pdzd11ENSMUSG00000015668Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDZD7 / Q9H5P4 / PDZ domain containing 7ENSG0000018686234
USH1C / Q9Y6N9 / USH1 protein network component harmoninENSG0000000661129
WHRN / Q9P202 / whirlinENSG0000009539726


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006768 biotin metabolic process TAS
 biological_processGO:0007269 neurotransmitter secretion IBA
 biological_processGO:0015939 pantothenate metabolic process TAS
 biological_processGO:0019730 antimicrobial humoral response TAS
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0045199 maintenance of epithelial cell apical/basal polarity IBA
 biological_processGO:0055085 transmembrane transport TAS
 biological_processGO:1903361 protein localization to basolateral plasma membrane IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005911 cell-cell junction IBA
 cellular_componentGO:0016323 basolateral plasma membrane IBA
 cellular_componentGO:0045202 synapse IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Biotin transport and metabolism
Vitamin B5 (pantothenate) metabolism
Transport of vitamins, nucleosides, and related molecules
Ion influx/efflux at host-pathogen interface
Ion transport by P-type ATPases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000177556 ATOX1 / O00244 / antioxidant 1 copper chaperone  / reaction
 ENSG00000138074 Q9Y289 / SLC5A6 / solute carrier family 5 member 6  / complex
 ENSG00000165240 ATP7A / Q04656 / ATPase copper transporting alpha  / complex






 

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