ENSMUSG00000015668


Mus musculus

Features
Gene ID: ENSMUSG00000015668
  
Biological name :Pdzd11
  
Synonyms : Pdzd11 / PDZ domain-containing protein 11 / Q9CZG9
  
Possible biological names infered from orthology : PDZ domain containing 11 / Q5EBL8
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: C3
Gene start: 100622883
Gene end: 100626568
  
Corresponding Affymetrix probe sets: 10605943 (MoGene1.0st)   1447865_x_at (Mouse Genome 430 2.0 Array)   1451269_at (Mouse Genome 430 2.0 Array)   1453518_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000015812
Ensembl peptide - ENSMUSP00000051068
NCBI entrez gene - 72621     See in Manteia.
MGI - MGI:1919871
RefSeq - XM_011247685
RefSeq - NM_028303
RefSeq - XM_006528302
RefSeq Peptide - NP_001343313
RefSeq Peptide - NP_082579
swissprot - Q9CZG9
Ensembl - ENSMUSG00000015668
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdzd11ENSDARG00000053194Danio rerio
 PDZD11ENSGALG00000004198Gallus gallus
 PDZD11ENSG00000120509Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pdzd7 / PDZ domain containing 7 / Q9H5P4*ENSMUSG0000007481834
Whrn / Q80VW5 / whirlin / Q9P202*ENSMUSG0000003913729
Ush1c / USH1 protein network component harmonin / Q9Y6N9*ENSMUSG0000003083829


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007269 neurotransmitter secretion IBA
 biological_processGO:0045199 maintenance of epithelial cell apical/basal polarity IBA
 biological_processGO:1903361 protein localization to basolateral plasma membrane IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0005911 cell-cell junction IBA
 cellular_componentGO:0016323 basolateral plasma membrane IBA
 cellular_componentGO:0045202 synapse IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008022 protein C-terminus binding ISS


Pathways (from Reactome)
Pathway description
Biotin transport and metabolism
Vitamin B5 (pantothenate) metabolism
Transport of vitamins, nucleosides, and related molecules
Ion influx/efflux at host-pathogen interface
Ion transport by P-type ATPases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000018585 Atox1 / O08997 / Copper transport protein ATOX1 / O00244* / antioxidant 1 copper chaperone*  / reaction
 ENSMUSG00000033792 Atp7a / Q64430 / Copper-transporting ATPase 1 / Q04656* / ATPase copper transporting alpha*  / complex
 ENSMUSG00000006641 Q5U4D8 / Slc5a6 / Sodium-dependent multivitamin transporter / Q9Y289* / solute carrier family 5 member 6*  / complex






 

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