ENSGALG00000004794


Gallus gallus

Features
Gene ID: ENSGALG00000004794
  
Biological name :H2AFY2
  
Synonyms : H2AFY2 / H2A histone family member Y2
  
Possible biological names infered from orthology : Core histone macro-H2A.2 / Q8CCK0 / Q9P0M6
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 11993572
Gene end: 12006063
  
Corresponding Affymetrix probe sets: Gga.3362.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007639
Ensembl peptide - ENSGALP00000063393
Ensembl peptide - ENSGALP00000061828
NCBI entrez gene - 423721     See in Manteia.
RefSeq - NM_001277338
RefSeq - XM_015288210
RefSeq - XM_015288211
RefSeq Peptide - NP_001264267
swissprot - E1BR08
swissprot - A0A1L1RX25
swissprot - A0A1L1RSN9
Ensembl - ENSGALG00000004794
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 h2afy2ENSDARG00000087897Danio rerio
 H2AFY2ENSG00000099284Homo sapiens
 H2afy2ENSMUSG00000020086Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
H2AFY / O93327 / Core histone macro-H2A.1 / Q9QZQ8* / O75367* / H2A histone family member Y*ENSGALG0000004014166
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000003264523
H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSGALG0000004570523
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000003571523
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000002731523
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000003157123
H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSGALG0000002644923
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000002837223
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000002711323
H2AFJ / histone H2A.J / Q6GSS7* / Q16777* / Q64523* / Q6FI13* / HIST2H2AC* / HIST2H2AA3* / Hist2h2aa1* / HIST2H2AA4* / Hist2h2aa2* / Histone H2A type 2-C * / Histone H2A type 2-A * / histo...ENSGALG0000003834323
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000002994123
ENSGALG0000001677120
ENSGALG0000001677020
H2AFB1* / H2AFB2* / H2AFB3* / P0C5Z0* / P0C5Y9* / H2A histone family member B3* / H2A histone family member B1* / H2A histone family member B2*ENSGALG0000001560912


Protein motifs (from Interpro)
Interpro ID Name
 IPR002119  Histone H2A
 IPR002589  Macro domain
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold
 IPR021171  Core histone macro-H2A
 IPR032454  Histone H2A, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0006342 chromatin silencing IBA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007549 dosage compensation IEA
 biological_processGO:0045618 positive regulation of keratinocyte differentiation IEA
 biological_processGO:0045814 negative regulation of gene expression, epigenetic IEA
 biological_processGO:0071169 establishment of protein localization to chromatin IEA
 biological_processGO:1901837 negative regulation of transcription of nucleolar large rRNA by RNA polymerase I IEA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0001740 Barr body IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0035098 ESC/E(Z) complex IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031490 chromatin DNA binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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