ENSGALG00000006217


Gallus gallus

Features
Gene ID: ENSGALG00000006217
  
Biological name :S100B
  
Synonyms : S100B / S100 calcium binding protein B
  
Possible biological names infered from orthology : P04271 / P50114 / S100 protein, beta polypeptide, neural
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 6920734
Gene end: 6923751
  
Corresponding Affymetrix probe sets: Gga.9168.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000033025
NCBI entrez gene - 424038     See in Manteia.
RefSeq - NM_001302142
RefSeq - XM_421894
RefSeq Peptide - NP_001289071
swissprot - E1C251
Ensembl - ENSGALG00000006217
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 s100bENSDARG00000057598Danio rerio
 S100BENSG00000160307Homo sapiens
 S100bENSMUSG00000033208Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
S100A1 / S100 calcium binding protein A1 / P23297*ENSGALG0000003445854
S100Z / S100 calcium binding protein Z / Q8WXG8* / S100 calcium binding protein, zeta*ENSGALG0000001498952
P07091* / P26447* / P29034* / S100A2* / S100A4* / S100 calcium binding protein A2* / S100 calcium binding protein A4*ENSGALG0000002661346
P07091* / P26447* / P29034* / S100A2* / S100A4* / S100 calcium binding protein A2* / S100 calcium binding protein A4*ENSGALG0000003759943
Q98953 / S100A6 / Protein S100-A6 / P06703* / P14069* / S100 calcium binding protein A6* / S100 calcium binding protein A6 (calcyclin)*ENSGALG0000004182638
P24479 / S100A11 / Protein S100-A11 / P50543* / P31949* / S100 calcium binding protein A11*ENSGALG0000003671136
P27003 / S100A10 / Protein S100-A10 / P60903* / P08207* / S100 calcium binding protein A10* / S100 calcium binding protein A10 (calpactin)*ENSGALG0000002877435


Protein motifs (from Interpro)
Interpro ID Name
 IPR001751  S100/Calbindin-D9k, conserved site
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR028481  Protein S100-B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007611 learning or memory IEA
 biological_processGO:0007613 memory IEA
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0048168 regulation of neuronal synaptic plasticity IEA
 cellular_componentGO:0001726 ruffle IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0044548 S100 protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IEA
 molecular_functionGO:0050786 RAGE receptor binding IEA


Pathways (from Reactome)
Pathway description
Advanced glycosylation endproduct receptor signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001547 P13127 / CAPZA1 / F-actin-capping protein subunit alpha-1 / P52907* / 4933400A11Rik* / RIKEN cDNA 4933400A11 gene* / capping actin protein of muscle Z-line alpha subunit 1*  / complex / reaction
 ENSGALG00000006217 S100B / S100 calcium binding protein B / P04271* / P50114* / S100 protein, beta polypeptide, neural*  / complex
 ENSGALG00000043437 P28497 / CAPZA2 / F-actin-capping protein subunit alpha-2 / P47754* / P47755* / capping actin protein of muscle Z-line alpha subunit 2*  / reaction / complex






 

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