ENSGALG00000008912


Gallus gallus

Features
Gene ID: ENSGALG00000008912
  
Biological name :ABCB1
  
Synonyms : ABCB1 / ATP binding cassette subfamily B member 1
  
Possible biological names infered from orthology : Abcb1a / Abcb1b / ABCB4 / ATP-binding cassette, sub-family B (MDR/TAP), member 1B / ATP binding cassette subfamily B member 4 / Multidrug resistance protein 1A / P06795 / P08183 / P21439 / P21440 / P21447 / Phosphatidylcholine translocator ABCB4
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 20693000
Gene end: 20781828
  
Corresponding Affymetrix probe sets: Gga.4109.1.S1_at (Chicken Array)   Gga.4109.1.S2_at (Chicken Array)   GgaAffx.5596.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037427
Ensembl peptide - ENSGALP00000058053
Ensembl peptide - ENSGALP00000052768
Ensembl peptide - ENSGALP00000050400
Ensembl peptide - ENSGALP00000014477
NCBI entrez gene - 395712     See in Manteia.
RefSeq - XM_015281293
RefSeq - NM_204894
RefSeq - XM_015281292
RefSeq Peptide - NP_990225
swissprot - F1NKW0
swissprot - E1BS63
swissprot - A0A1D5PYJ8
swissprot - A0A1D5PCB3
Ensembl - ENSGALG00000008912
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcb4ENSDARG00000010936Danio rerio
 ABCB1ENSG00000085563Homo sapiens
 ABCB4ENSG00000005471Homo sapiens
 Abcb1aENSMUSG00000040584Mus musculus
 Abcb1bENSMUSG00000028970Mus musculus
 Abcb4ENSMUSG00000042476Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000001090153
ABCB11 / ATP binding cassette subfamily B member 11 / O95342* / Q9QY30* / ATP-binding cassette, sub-family B (MDR/TAP), member 11*ENSGALG0000001089148


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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