ENSGALG00000009523


Gallus gallus

Features
Gene ID: ENSGALG00000009523
  
Biological name :CNTN1
  
Synonyms : CNTN1 / Contactin-1 / P14781
  
Possible biological names infered from orthology : Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA. / P12960 / Q12860
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 28757424
Gene end: 28995706
  
Corresponding Affymetrix probe sets: Gga.4796.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055209
Ensembl peptide - ENSGALP00000060237
Ensembl peptide - ENSGALP00000055820
Ensembl peptide - ENSGALP00000038042
Ensembl peptide - ENSGALP00000050725
NCBI entrez gene - 417786     See in Manteia.
RefSeq - NM_001004381
RefSeq Peptide - NP_001004381
swissprot - A0A1L1RN78
swissprot - A0A1D5PSD5
swissprot - P14781
Ensembl - ENSGALG00000009523
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cntn1aENSDARG00000087843Danio rerio
 cntn1bENSDARG00000045685Danio rerio
 CNTN1ENSG00000018236Homo sapiens
 Cntn1ENSMUSG00000055022Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNTN2 / contactin-2 precursor / Q02246* / Q61330* / contactin 2*ENSGALG0000000065348
CNTN5 / Q90W79 / Contactin-5 / O94779* / P68500*ENSGALG0000001719742
CNTN4 / contactin 4 / Q69Z26* / Q8IWV2*ENSGALG0000000826341
CNTN3 / contactin 3 / Q07409* / Q9P232*ENSGALG0000000786238
CNTN6 / contactin 6 / Q9JMB8* / Q9UQ52*ENSGALG0000000792737
NFASC / O42414 / Neurofascin / O94856* / Q810U3*ENSGALG0000003177627
NRCAM / neuronal cell adhesion molecule precursor / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSGALG0000000951425
CHL1 / cell adhesion molecule L1 like / O00533* / P70232* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecule L1-like protein*ENSGALG0000003785624


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032991  Contactin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0010765 positive regulation of sodium ion transport IEA
 biological_processGO:0010976 positive regulation of neuron projection development IEA
 biological_processGO:0021549 cerebellum development IEA
 biological_processGO:0031175 neuron projection development IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0043209 myelin sheath IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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