ENSDARG00000087843


Danio rerio

Features
Gene ID: ENSDARG00000087843
  
Biological name :cntn1a
  
Synonyms : cntn1a / contactin 1a
  
Possible biological names infered from orthology : CNTN1 / contactin 1 / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA. / P12960 / Q12860
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 12012
Gene end: 147663
  
Corresponding Affymetrix probe sets: Dr.24963.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000132710
Ensembl peptide - ENSDARP00000140366
swissprot - A0A0G2KK51
swissprot - A0A0G2L6G5
ZFIN ID - ZDB-GENE-030427-1
Ensembl - ENSDARG00000087843
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNTN1ENSGALG00000009523Gallus gallus
 CNTN1ENSG00000018236Homo sapiens
 Cntn1ENSMUSG00000055022Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568537
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158430
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816129
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345428
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288028
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047228
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364726
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639619
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109919
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310918
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788118
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502518
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714918
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG0000010427711
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG0000011276710
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG000000569106


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032991  Contactin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0031175 neuron projection development IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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