ENSDARG00000112767


Danio rerio

Features
Gene ID: ENSDARG00000112767
  
Biological name :LO017951.1
  
Synonyms : LO017951.1
  
Possible biological names infered from orthology : CNTN6 / contactin 6 / Q9JMB8 / Q9UQ52
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 45346808
Gene end: 45376758
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000146384
Ensembl peptide - ENSDARP00000157412
Ensembl - ENSDARG00000112767
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNTN6ENSGALG00000007927Gallus gallus
 CNTN6ENSG00000134115Homo sapiens
 Cntn6ENSMUSG00000030092Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816154
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288051
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345449
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158448
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364748
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047234
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568534
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310927
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639627
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788125
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502524
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784324
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109924
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714923
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG000001042771
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG000000569101


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR033007  Contactin-4


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr