ENSDARG00000056910


Danio rerio

Features
Gene ID: ENSDARG00000056910
  
Biological name :CU234171.1
  
Synonyms : CU234171.1
  
Possible biological names infered from orthology : neurofascin / NFASC / O94856 / Q810U3
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 17899226
Gene end: 17907404
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073942
swissprot - E7FG37
Ensembl - ENSDARG00000056910
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFASCENSGALG00000031776Gallus gallus
 NFASCENSG00000163531Homo sapiens
 NfascENSMUSG00000026442Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109955
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639644
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310934
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788134
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714932
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502528
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158427
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047226
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345426
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816124
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288024
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG0000010427723
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364722
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568522
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784313
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG000001127671


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR026965  Neurofascin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Neurofascin interactions
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr