ENSDARG00000061099


Danio rerio

Features
Gene ID: ENSDARG00000061099
  
Biological name :nfasca
  
Synonyms : neurofascin homolog (chicken) a / nfasca
  
Possible biological names infered from orthology : neurofascin / NFASC / O94856 / Q810U3
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 23704410
Gene end: 23884805
  
Corresponding Affymetrix probe sets: Dr.12869.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000109029
Ensembl peptide - ENSDARP00000109567
Ensembl peptide - ENSDARP00000143531
Ensembl peptide - ENSDARP00000081155
Ensembl peptide - ENSDARP00000102860
swissprot - A0A286Y8N9
swissprot - E7F1A9
swissprot - E7F1Y1
swissprot - F1QFZ7
ZFIN ID - ZDB-GENE-080229-6
Ensembl - ENSDARG00000061099
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFASCENSGALG00000031776Gallus gallus
 NFASCENSG00000163531Homo sapiens
 NfascENSMUSG00000026442Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639644
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310934
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788132
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714930
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502530
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158420
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345419
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047219
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816119
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288019
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568518
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364717
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG0000005691015
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784312
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG000001042778
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG000001127677


Protein motifs (from Interpro)
Interpro ID Name
 IPR003006  Immunoglobulin/major histocompatibility complex, conserved site
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR026965  Neurofascin
 IPR026966  Neurofascin/L1/NrCAM, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0007422 peripheral nervous system development IEA
 biological_processGO:0019226 transmission of nerve impulse IEA
 biological_processGO:0042552 myelination IEA
 biological_processGO:0050808 synapse organization IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Neurofascin interactions
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000175 posterior lateral line nerve posterior lateral line nerve sodium channel complex decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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