ENSDARG00000077881


Danio rerio

Features
Gene ID: ENSDARG00000077881
  
Biological name :chl1a
  
Synonyms : cell adhesion molecule L1-like a / chl1a
  
Possible biological names infered from orthology : cell adhesion molecule L1 like / CHL1 / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecule L1-like protein / O00533 / P70232
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 11285662
Gene end: 11452312
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000103902
Ensembl peptide - ENSDARP00000136700
Ensembl peptide - ENSDARP00000116141
NCBI entrez gene - 566148     See in Manteia.
RefSeq - NM_001163106
RefSeq Peptide - NP_001156578
swissprot - E9QCF0
swissprot - A0A0R4ILD7
swissprot - F1QAV8
ZFIN ID - ZDB-GENE-090313-201
Ensembl - ENSDARG00000077881
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHL1ENSGALG00000037856Gallus gallus
 CHL1ENSG00000134121Homo sapiens
 Chl1ENSMUSG00000030077Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310955
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639640
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109938
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714937
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502536
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158424
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816123
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288023
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047223
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345423
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568522
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364721
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784314
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG0000005691011
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG0000010427710
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG000001127678


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR026966  Neurofascin/L1/NrCAM, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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