ENSDARG00000062880


Danio rerio

Features
Gene ID: ENSDARG00000062880
  
Biological name :cntn3a.1
  
Synonyms : cntn3a.1 / contactin 3a, tandem duplicate 1
  
Possible biological names infered from orthology : CNTN4 / contactin 4 / Q69Z26 / Q8IWV2
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 11669109
Gene end: 11861393
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000085849
Ensembl peptide - ENSDARP00000121904
NCBI entrez gene - 569437     See in Manteia.
swissprot - F1QQK1
swissprot - F6P8D9
ZFIN ID - ZDB-GENE-081030-10
Ensembl - ENSDARG00000062880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNTN4ENSGALG00000008263Gallus gallus
 CNTN4ENSG00000144619Homo sapiens
 Cntn4ENSMUSG00000064293Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816173
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345454
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364750
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158447
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047237
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568537
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310926
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109925
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639625
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714925
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788125
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502524
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784324
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG0000010427722
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG0000011276719
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG000000569109


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR033007  Contactin-4


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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