ENSDARG00000104277


Danio rerio

Features
Gene ID: ENSDARG00000104277
  
Biological name :BX942846.1
  
Synonyms : BX942846.1
  
Possible biological names infered from orthology : CNTN6 / contactin 6 / Q9JMB8 / Q9UQ52
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 45114613
Gene end: 45328910
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000131359
Ensembl peptide - ENSDARP00000139141
Ensembl peptide - ENSDARP00000149465
swissprot - A0A0G2KGC4
swissprot - A0A0G2L321
Ensembl - ENSDARG00000104277
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNTN6ENSGALG00000007927Gallus gallus
 CNTN6ENSG00000134115Homo sapiens
 Cntn6ENSMUSG00000030092Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288055
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816154
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345454
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158450
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364748
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047240
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568539
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639627
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788127
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714926
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310925
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502525
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109925
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784324
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG0000005691021
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG000001127670


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0022008 neurogenesis IEA
 biological_processGO:0030182 neuron differentiation IEA
 molecular_functionGO:0005112 Notch binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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