ENSG00000134115


Homo sapiens

Features
Gene ID: ENSG00000134115
  
Biological name :CNTN6
  
Synonyms : CNTN6 / contactin 6 / Q9UQ52
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p26.3
Gene start: 1092576
Gene end: 1404217
  
Corresponding Affymetrix probe sets: 207195_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000341882
Ensembl peptide - ENSP00000380616
Ensembl peptide - ENSP00000407822
Ensembl peptide - ENSP00000408460
Ensembl peptide - ENSP00000377804
NCBI entrez gene - 27255     See in Manteia.
OMIM - 607220
RefSeq - XM_017006176
RefSeq - NM_001289080
RefSeq - NM_001289081
RefSeq - NM_014461
RefSeq - XM_005265058
RefSeq - XM_011533590
RefSeq - XM_011533591
RefSeq - XM_017006171
RefSeq - XM_017006172
RefSeq - XM_017006173
RefSeq - XM_017006174
RefSeq - XM_017006175
RefSeq Peptide - NP_001336283
RefSeq Peptide - NP_001336284
RefSeq Peptide - NP_001336279
RefSeq Peptide - NP_001336280
RefSeq Peptide - NP_001336281
RefSeq Peptide - NP_001336282
RefSeq Peptide - NP_055276
RefSeq Peptide - NP_001276009
RefSeq Peptide - NP_001276010
swissprot - F8VWS7
swissprot - F8WDQ0
swissprot - A0A024R2C7
swissprot - Q9UQ52
Ensembl - ENSG00000134115
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX942846.1ENSDARG00000104277Danio rerio
 LO017951.1ENSDARG00000112767Danio rerio
 CNTN6ENSGALG00000007927Gallus gallus
 Cntn6ENSMUSG00000030092Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNTN4 / Q8IWV2 / contactin 4ENSG0000014461960
CNTN3 / Q9P232 / contactin 3ENSG0000011380559
CNTN5 / O94779 / contactin 5ENSG0000014997250
CNTN2 / Q02246 / contactin 2ENSG0000018414442
CNTN1 / Q12860 / contactin 1ENSG0000001823641
NRCAM / Q92823 / neuronal cell adhesion moleculeENSG0000009112927
L1CAM / P32004 / L1 cell adhesion moleculeENSG0000019891026
CHL1 / O00533 / cell adhesion molecule L1 likeENSG0000013412125
NFASC / O94856 / neurofascinENSG0000016353124


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR033009  Contactin-6
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007219 Notch signaling pathway IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007417 central nervous system development TAS
 biological_processGO:0022008 neurogenesis IEA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0045747 positive regulation of Notch signaling pathway IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 molecular_functionGO:0005112 Notch binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
CHL1 interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000134121 CHL1 / O00533 / cell adhesion molecule L1 like  / reaction / complex






 

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