ENSG00000184144


Homo sapiens

Features
Gene ID: ENSG00000184144
  
Biological name :CNTN2
  
Synonyms : CNTN2 / contactin 2 / Q02246
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q32.1
Gene start: 205042937
Gene end: 205078284
  
Corresponding Affymetrix probe sets: 206970_at (Human Genome U133 Plus 2.0 Array)   230045_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000491080
Ensembl peptide - ENSP00000491474
Ensembl peptide - ENSP00000492617
Ensembl peptide - ENSP00000492495
Ensembl peptide - ENSP00000492457
Ensembl peptide - ENSP00000491982
Ensembl peptide - ENSP00000491959
Ensembl peptide - ENSP00000491680
Ensembl peptide - ENSP00000491671
Ensembl peptide - ENSP00000491665
Ensembl peptide - ENSP00000330633
Ensembl peptide - ENSP00000489754
NCBI entrez gene - 6900     See in Manteia.
OMIM - 190197
RefSeq - NM_005076
RefSeq - NM_001346083
RefSeq - XM_017002198
RefSeq - XM_017002199
RefSeq Peptide - NP_001333012
RefSeq Peptide - NP_005067
swissprot - A0A1B0GTL7
swissprot - A0A1W2PR60
swissprot - Q02246
swissprot - A0A024R9B4
swissprot - A0A1W2PQJ4
swissprot - A0A1W2PQ86
swissprot - A0A1W2PQ11
swissprot - A0A1W2PPY1
swissprot - A0A1W2PPQ9
Ensembl - ENSG00000184144
  
Related genetic diseases (OMIM): 615400 - ?Epilepsy, myoclonic, familial adult, 5, 615400
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cntn2ENSDARG00000000472Danio rerio
 CNTN2ENSGALG00000000653Gallus gallus
 Cntn2ENSMUSG00000053024Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNTN1 / Q12860 / contactin 1ENSG0000001823649
CNTN3 / Q9P232 / contactin 3ENSG0000011380543
CNTN5 / O94779 / contactin 5ENSG0000014997243
CNTN6 / Q9UQ52 / contactin 6ENSG0000013411542
CNTN4 / Q8IWV2 / contactin 4ENSG0000014461942
L1CAM / P32004 / L1 cell adhesion moleculeENSG0000019891028
NRCAM / Q92823 / neuronal cell adhesion moleculeENSG0000009112927
CHL1 / O00533 / cell adhesion molecule L1 likeENSG0000013412127
NFASC / O94856 / neurofascinENSG0000016353124


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032991  Contactin-2
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IEA
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0007155 cell adhesion NAS
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0007413 axonal fasciculation IEA
 biological_processGO:0007612 learning IEA
 biological_processGO:0007628 adult walking behavior IEA
 biological_processGO:0010769 regulation of cell morphogenesis involved in differentiation IEA
 biological_processGO:0010954 positive regulation of protein processing IEA
 biological_processGO:0021853 cerebral cortex GABAergic interneuron migration IEA
 biological_processGO:0022010 central nervous system myelination IEA
 biological_processGO:0031133 regulation of axon diameter IEA
 biological_processGO:0031175 neuron projection development IEA
 biological_processGO:0031623 receptor internalization IEA
 biological_processGO:0045163 clustering of voltage-gated potassium channels ISS
 biological_processGO:0045665 negative regulation of neuron differentiation IEA
 biological_processGO:0048168 regulation of neuronal synaptic plasticity IEA
 biological_processGO:0048710 regulation of astrocyte differentiation IEA
 biological_processGO:0060168 positive regulation of adenosine receptor signaling pathway IEA
 biological_processGO:0071205 protein localization to juxtaparanode region of axon ISS
 biological_processGO:0071206 establishment of protein localization to juxtaparanode region of axon IEA
 biological_processGO:0097090 presynaptic membrane organization IMP
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0008076 voltage-gated potassium channel complex IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0033268 node of Ranvier ISS
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0043209 myelin sheath ISS
 cellular_componentGO:0044224 juxtaparanode region of axon ISS
 cellular_componentGO:0045202 synapse ISS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0042802 identical protein binding TAS
 molecular_functionGO:0043621 protein self-association IEA


Pathways (from Reactome)
Pathway description
L1CAM interactions
NCAM1 interactions
NrCAM interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
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 HP:0002197 Generalized seizures "Recurrent generalized `seizures` (HP:0001250), that is seizures that affect both cerebral hemispheres from the start of the seizure, producing loss of consciousness." [HPO:probinson]
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 HP:0002315 Headache "Cephalgia, or pain in the head originating from the cerebral vault." [HPO:curators]
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002378 Hand tremor 
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 HP:0007359 Partial seizures "Recurrent partial `seizures` (HP:0001250). In a partial seizure, the electrical disturbance is limited to one part or side of the brain. That is, partial epilepsies are epileptic disorders in which clinical or laboratory findings disclose a localized origin of seizures." [HPO:curators]
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 HP:0100576 Amaurosis fugax "A transient visual disturbance that is typically caused by a circulatory, ocular or neurological underlying condition." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000198910 L1CAM / P32004 / L1 cell adhesion molecule  / complex / reaction
 ENSG00000091129 NRCAM / Q92823 / neuronal cell adhesion molecule  / reaction / complex
 ENSG00000149294 NCAM1 / P13591 / neural cell adhesion molecule 1  / reaction / complex






 

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