ENSG00000144619


Homo sapiens

Features
Gene ID: ENSG00000144619
  
Biological name :CNTN4
  
Synonyms : CNTN4 / contactin 4 / Q8IWV2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p26.3
Gene start: 2098813
Gene end: 3057956
  
Corresponding Affymetrix probe sets: 229084_at (Human Genome U133 Plus 2.0 Array)   237177_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000396719
Ensembl peptide - ENSP00000396010
Ensembl peptide - ENSP00000404085
Ensembl peptide - ENSP00000422120
Ensembl peptide - ENSP00000413642
Ensembl peptide - ENSP00000408594
Ensembl peptide - ENSP00000380600
Ensembl peptide - ENSP00000380602
Ensembl peptide - ENSP00000390560
NCBI entrez gene - 152330     See in Manteia.
OMIM - 607280
RefSeq - XM_017005788
RefSeq - XM_011533426
RefSeq - XM_011533427
RefSeq - XM_011533428
RefSeq - XM_011533429
RefSeq - XM_011533430
RefSeq - XM_011533431
RefSeq - XM_017005782
RefSeq - XM_017005783
RefSeq - XM_017005784
RefSeq - XM_017005785
RefSeq - XM_017005786
RefSeq - XM_017005787
RefSeq - NM_001206955
RefSeq - NM_001206956
RefSeq - NM_175607
RefSeq - NM_175613
RefSeq - XM_006713004
RefSeq - XM_011533425
RefSeq Peptide - NP_001337024
RefSeq Peptide - NP_783200
RefSeq Peptide - NP_783302
RefSeq Peptide - NP_001193884
RefSeq Peptide - NP_001193885
swissprot - A0A024R2E5
swissprot - C9JMQ2
swissprot - Q8IWV2
swissprot - C9JIY1
swissprot - C9JGK9
swissprot - F8WD58
swissprot - H0Y8U1
Ensembl - ENSG00000144619
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cntn3a.1ENSDARG00000062880Danio rerio
 cntn4ENSDARG00000098161Danio rerio
 CNTN4ENSGALG00000008263Gallus gallus
 Cntn4ENSMUSG00000064293Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNTN3 / Q9P232 / contactin 3ENSG0000011380565
CNTN6 / Q9UQ52 / contactin 6ENSG0000013411560
CNTN5 / O94779 / contactin 5ENSG0000014997255
CNTN1 / Q12860 / contactin 1ENSG0000001823644
CNTN2 / Q02246 / contactin 2ENSG0000018414443
NRCAM / Q92823 / neuronal cell adhesion moleculeENSG0000009112927
L1CAM / P32004 / L1 cell adhesion moleculeENSG0000019891027
CHL1 / O00533 / cell adhesion molecule L1 likeENSG0000013412126
NFASC / O94856 / neurofascinENSG0000016353126


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR033007  Contactin-4
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006501 C-terminal protein lipidation TAS
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007158 neuron cell-cell adhesion TAS
 biological_processGO:0007399 nervous system development IMP
 biological_processGO:0007409 axonogenesis TAS
 biological_processGO:0007411 axon guidance TAS
 biological_processGO:0007413 axonal fasciculation TAS
 biological_processGO:0007420 brain development ISS
 biological_processGO:0031175 neuron projection development ISS
 biological_processGO:0045665 negative regulation of neuron differentiation IMP
 biological_processGO:0048167 regulation of synaptic plasticity TAS
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030424 axon NAS
 cellular_componentGO:0031225 anchored component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Post-translational modification: synthesis of GPI-anchored proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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