ENSDARG00000098161


Danio rerio

Features
Gene ID: ENSDARG00000098161
  
Biological name :cntn4
  
Synonyms : cntn4 / contactin 4
  
Possible biological names infered from orthology : Q69Z26 / Q8IWV2
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 45494227
Gene end: 45838103
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134774
Ensembl peptide - ENSDARP00000136623
NCBI entrez gene - 571349     See in Manteia.
RefSeq - NM_001080051
RefSeq Peptide - NP_001073520
swissprot - F1QGN2
swissprot - A0A0H2UKP7
ZFIN ID - ZDB-GENE-060929-776
Ensembl - ENSDARG00000098161
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNTN4ENSGALG00000008263Gallus gallus
 CNTN4ENSG00000144619Homo sapiens
 Cntn4ENSMUSG00000064293Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288073
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345456
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364752
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158449
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047238
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568536
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788126
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714926
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109926
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639626
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310926
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502525
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784325
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG0000010427721
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG0000011276720
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG000000569109


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007411 axon guidance IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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