ENSDARG00000006396


Danio rerio

Features
Gene ID: ENSDARG00000006396
  
Biological name :nrcama
  
Synonyms : neuronal cell adhesion molecule a / nrcama
  
Possible biological names infered from orthology : neuronal cell adhesion molecule / NRCAM / Q810U4 / Q92823
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 13696537
Gene end: 13728375
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000099934
Ensembl peptide - ENSDARP00000112170
Ensembl peptide - ENSDARP00000155523
NCBI entrez gene - 556537     See in Manteia.
RefSeq - NM_001044805
RefSeq - XM_021475023
RefSeq Peptide - NP_001038270
swissprot - Q5TYT1
swissprot - F1R8X6
ZFIN ID - ZDB-GENE-041210-235
Ensembl - ENSDARG00000006396
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NRCAMENSGALG00000009514Gallus gallus
 NRCAMENSG00000091129Homo sapiens
 NrcamENSMUSG00000020598Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109947
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310938
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788135
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502535
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714934
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158422
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816121
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345421
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047220
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288020
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364719
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568519
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784313
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG0000005691013
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG000001042779
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG000001127678


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013151  Immunoglobulin
 IPR013783  Immunoglobulin-like fold
 IPR026966  Neurofascin/L1/NrCAM, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Neurofascin interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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