ENSGALG00000007927


Gallus gallus

Features
Gene ID: ENSGALG00000007927
  
Biological name :CNTN6
  
Synonyms : CNTN6 / contactin 6
  
Possible biological names infered from orthology : Q9JMB8 / Q9UQ52
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 17581013
Gene end: 17682115
  
Corresponding Affymetrix probe sets: GgaAffx.4969.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012855
NCBI entrez gene - 427597     See in Manteia.
RefSeq - XM_004944703
RefSeq - XM_015293210
RefSeq - XM_004944706
RefSeq - XM_015293209
swissprot - F1NUN9
Ensembl - ENSGALG00000007927
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX942846.1ENSDARG00000104277Danio rerio
 LO017951.1ENSDARG00000112767Danio rerio
 CNTN6ENSG00000134115Homo sapiens
 Cntn6ENSMUSG00000030092Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNTN4 / contactin 4 / Q69Z26* / Q8IWV2*ENSGALG0000000826360
CNTN3 / contactin 3 / Q07409* / Q9P232*ENSGALG0000000786254
CNTN5 / Q90W79 / Contactin-5 / O94779* / P68500*ENSGALG0000001719751
CNTN2 / contactin-2 precursor / Q02246* / Q61330* / contactin 2*ENSGALG0000000065344
CNTN1 / P14781 / Contactin-1 / Q12860* / P12960* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSGALG0000000952340
NRCAM / neuronal cell adhesion molecule precursor / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSGALG0000000951428
CHL1 / cell adhesion molecule L1 like / O00533* / P70232* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecule L1-like protein*ENSGALG0000003785627
NFASC / O42414 / Neurofascin / O94856* / Q810U3*ENSGALG0000003177626


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR033009  Contactin-6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0022008 neurogenesis IEA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0045747 positive regulation of Notch signaling pathway IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0005112 Notch binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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