ENSGALG00000010581


Gallus gallus

Features
Gene ID: ENSGALG00000010581
  
Biological name :SEL1L
  
Synonyms : SEL1L / SEL1L ERAD E3 ligase adaptor subunit
  
Possible biological names infered from orthology : Q9UBV2 / Q9Z2G6 / sel-1 suppressor of lin-12-like (C. elegans)
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 40987357
Gene end: 41014216
  
Corresponding Affymetrix probe sets: Gga.10455.1.S1_at (Chicken Array)   Gga.19683.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017201
NCBI entrez gene - 423391     See in Manteia.
RefSeq - XM_421303
swissprot - E1C6X2
Ensembl - ENSGALG00000010581
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sel1lENSDARG00000004581Danio rerio
 SEL1LENSG00000071537Homo sapiens
 Sel1lENSMUSG00000020964Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEL1L3 / SEL1L family member 3 / 3 * / Q68CR1* / Q80TS8*ENSGALG0000003954921


Protein motifs (from Interpro)
Interpro ID Name
 IPR000562  Fibronectin type II domain
 IPR006597  Sel1-like repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013806  Kringle-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006641 triglyceride metabolic process IEA
 biological_processGO:0009306 protein secretion IEA
 biological_processGO:0030970 retrograde protein transport, ER to cytosol IEA
 biological_processGO:0034976 response to endoplasmic reticulum stress IEA
 biological_processGO:0036503 ERAD pathway IEA
 cellular_componentGO:0000839 Hrd1p ubiquitin ligase ERAD-L complex IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0036513 Derlin-1 retrotranslocation complex IEA


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport
Hedgehog ligand biogenesis
ER Quality Control Compartment (ERQC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction
 ENSGALG00000041844 DERL2 / derlin 2 / Q8BNI4* / Q9GZP9*  / complex
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction






 

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