ENSDARG00000004581


Danio rerio

Features
Gene ID: ENSDARG00000004581
  
Biological name :sel1l
  
Synonyms : sel1l / sel-1 suppressor of lin-12-like (C. elegans)
  
Possible biological names infered from orthology : Q9UBV2 / Q9Z2G6 / SEL1L ERAD E3 ligase adaptor subunit
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 26987416
Gene end: 27003298
  
Corresponding Affymetrix probe sets: Dr.15492.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000007196
NCBI entrez gene - 568615     See in Manteia.
swissprot - Q5RIK6
ZFIN ID - ZDB-GENE-041001-122
Ensembl - ENSDARG00000004581
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEL1LENSGALG00000010581Gallus gallus
 SEL1LENSG00000071537Homo sapiens
 Sel1lENSMUSG00000020964Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-24p1.6 / 3 * / Q80TS8* / Q68CR1* / SEL1L3* / SEL1L family member 3*ENSDARG0000002878415
si:dkey-24p1.6ENSDARG000000972125


Protein motifs (from Interpro)
Interpro ID Name
 IPR000562  Fibronectin type II domain
 IPR006597  Sel1-like repeat
 IPR013806  Kringle-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport
Hedgehog ligand biogenesis
ER Quality Control Compartment (ERQC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000020008 vcp / Q7ZU99 / valosin containing protein / P55072* / Q01853*  / complex
 ENSDARG00000042401 derl2 / derlin 2 / Q9GZP9*  / complex
 ENSDARG00000017842 syvn1 / synovial apoptosis inhibitor 1, synoviolin / Q86TM6* / synoviolin 1*  / complex






 

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contact: otassy@igbmc.fr