ENSGALG00000010653


Gallus gallus

Features
Gene ID: ENSGALG00000010653
  
Biological name :SMYD3
  
Synonyms : SET and MYND domain containing 3 / SMYD3
  
Possible biological names infered from orthology : Histone-lysine N-methyltransferase SMYD3 / Q9CWR2 / Q9H7B4
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 34311459
Gene end: 34422873
  
Corresponding Affymetrix probe sets: Gga.10828.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000031243
Ensembl peptide - ENSGALP00000058216
Ensembl peptide - ENSGALP00000048267
NCBI entrez gene - 421489     See in Manteia.
RefSeq - XM_015283995
swissprot - A0A1D5PZ08
swissprot - A0A1D5P6E2
swissprot - F1NM95
Ensembl - ENSGALG00000010653
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smyd3ENSDARG00000058050Danio rerio
 SMYD3ENSG00000185420Homo sapiens
 Smyd3ENSMUSG00000055067Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SMYD2 / SET and MYND domain containing 2 / Q8R5A0* / Q9NRG4* / N-lysine methyltransferase SMYD2 *ENSGALG0000000978831
SMYD1 / histone-lysine N-methyltransferase SMYD1 / P97443* / Q8NB12* / SET and MYND domain containing 1*ENSGALG0000001593531


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0006469 negative regulation of protein kinase activity IEA
 biological_processGO:0014904 myotube cell development IEA
 biological_processGO:0033138 positive regulation of peptidyl-serine phosphorylation IEA
 biological_processGO:0034968 histone lysine methylation IEA
 biological_processGO:0045184 establishment of protein localization IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0071549 cellular response to dexamethasone stimulus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000993 RNA polymerase II core binding IEA
 molecular_functionGO:0001162 RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0018024 histone-lysine N-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
PKMTs methylate histone lysines


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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