ENSDARG00000058050


Danio rerio

Features
Gene ID: ENSDARG00000058050
  
Biological name :smyd3
  
Synonyms : SET and MYND domain containing 3 / smyd3
  
Possible biological names infered from orthology : Histone-lysine N-methyltransferase SMYD3 / Q9CWR2 / Q9H7B4
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 11728920
Gene end: 12058171
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000096007
swissprot - E7EZZ6
ZFIN ID - ZDB-GENE-051120-138
Ensembl - ENSDARG00000058050
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SMYD3ENSGALG00000010653Gallus gallus
 SMYD3ENSG00000185420Homo sapiens
 Smyd3ENSMUSG00000055067Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5RGL7 / smyd2b / SET and MYND domain containing 2b / SMYD2* / Q8R5A0* / Q9NRG4* / SET and MYND domain containing 2* / N-lysine methyltransferase SMYD2 *ENSDARG0000000562930
smyd1b / SET and MYND domain containing 1b / SMYD1* / P97443* / Q8NB12* / SET and MYND domain containing 1*ENSDARG0000009125330
smyd1a / SET and MYND domain containing 1a / SMYD1* / P97443* / Q8NB12* / SET and MYND domain containing 1*ENSDARG0000000928029
smyd2a / SET and MYND domain containing 2a / SMYD2* / Q8R5A0* / Q9NRG4* / SET and MYND domain containing 2* / N-lysine methyltransferase SMYD2 *ENSDARG0000005515128


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR002893  Zinc finger, MYND-type
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003007 heart morphogenesis IMP
 biological_processGO:0007507 heart development IMP
 biological_processGO:0060538 skeletal muscle organ development IMP


Pathways (from Reactome)
Pathway description
PKMTs methylate histone lysines


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000114 heart heart morphology , abnormal
heart hypoplastic , abnormal
heart linear , abnormal
Show

 ZFA:0001094 whole organism whole organism curved , abnormal
whole organism decreased length , abnormal
whole organism monstrous , abnormal
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 ZFA:0001115 trunk trunk curved dorsal , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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