ENSDARG00000055151


Danio rerio

Features
Gene ID: ENSDARG00000055151
  
Biological name :smyd2a
  
Synonyms : SET and MYND domain containing 2a / smyd2a
  
Possible biological names infered from orthology : N-lysine methyltransferase SMYD2 / Q8R5A0 / Q9NRG4 / SET and MYND domain containing 2 / SMYD2
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 32745763
Gene end: 32779556
  
Corresponding Affymetrix probe sets: Dr.14802.1.A1_at (Zebrafish Array)   NM_001013550_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000071926
NCBI entrez gene - 541423     See in Manteia.
RefSeq - NM_001013550
RefSeq Peptide - NP_001013568
swissprot - F1QAG3
ZFIN ID - ZDB-GENE-050320-126
Ensembl - ENSDARG00000055151
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SMYD2ENSGALG00000009788Gallus gallus
 SMYD2ENSG00000143499Homo sapiens
 Smyd2ENSMUSG00000026603Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5RGL7 / smyd2b / SET and MYND domain containing 2b / SMYD2* / Q8R5A0* / Q9NRG4* / SET and MYND domain containing 2* / N-lysine methyltransferase SMYD2 *ENSDARG0000000562960
smyd1b / SET and MYND domain containing 1b / SMYD1* / P97443* / Q8NB12* / SET and MYND domain containing 1*ENSDARG0000009125330
smyd3 / SET and MYND domain containing 3 / Q9CWR2* / Q9H7B4* / Histone-lysine N-methyltransferase SMYD3 *ENSDARG0000005805027
smyd1a / SET and MYND domain containing 1a / SMYD1* / P97443* / Q8NB12* / SET and MYND domain containing 1*ENSDARG0000000928026


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR002893  Zinc finger, MYND-type
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Methylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle malformed , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000114 heart heart elongated , abnormal
heart decreased thickness , abnormal
heart decreased contractility , abnormal
heart decreased functionality , abnormal
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 ZFA:0000154 sinus venosus sinus venosus edematous , abnormal
Show

 ZFA:0000471 atrium atrium malformed , abnormal
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 ZFA:0001058 caudal fin caudal fin morphology , abnormal
caudal fin absent , abnormal
caudal fin upturned , abnormal
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 ZFA:0001094 whole organism whole organism decreased mobility , abnormal
Show

 ZFA:0001117 post-vent region post-vent region increased curvature , abnormal
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 ZFA:0005277 skeletal muscle skeletal muscle morphology , abnormal
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 ZFA:0009115 skeletal muscle cell skeletal muscle cell disorganized , abnormal
skeletal muscle cell sarcomere disorganized , abnormal
skeletal muscle cell Z disc disorganized , abnormal
skeletal muscle cell I band disorganized , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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