ENSGALG00000010875


Gallus gallus

Features
Gene ID: ENSGALG00000010875
  
Biological name :ITGB8
  
Synonyms : integrin subunit beta 8 / ITGB8
  
Possible biological names infered from orthology : P26012
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 30066616
Gene end: 30116384
  
Corresponding Affymetrix probe sets: Gga.257.1.S1_s_at (Chicken Array)   GgaAffx.23361.1.S1_at (Chicken Array)   GgaAffx.23361.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058544
Ensembl peptide - ENSGALP00000017656
NCBI entrez gene - 395470     See in Manteia.
RefSeq - XM_015281863
RefSeq - XM_015281860
RefSeq - XM_015281861
RefSeq - XM_003640686
swissprot - F1NJ74
swissprot - A0A1D5PZX6
Ensembl - ENSGALG00000010875
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 itgb8ENSDARG00000028222Danio rerio
 ITGB8ENSG00000105855Homo sapiens
 Itgb8ENSMUSG00000025321Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ITGB5 / integrin beta-5 precursor / P18084* / integrin subunit beta 5*ENSGALG0000002976633
ITGB3 / P05106* / O54890* / AC068234.1* / Integrin beta-3 * / integrin subunit beta 3*ENSGALG0000000037932
ITGB6 / integrin subunit beta 6 / P18564* / Q9Z0T9* / Integrin beta-6 *ENSGALG0000001114132
ITGB1 / integrin subunit beta 1 / P05556* / P09055* / Integrin beta-1 *ENSGALG0000000714532
ITGB2 / integrin beta-2 precursor / Itgb2l* / P05107* / Q3UV74* / integrin subunit beta 2* / Integrin beta-2-like protein *ENSGALG0000000751129
ITGB4 / integrin subunit beta 4 / A2A863* / P16144* / Integrin beta-4 *ENSGALG0000000238926
ITGBL1 / integrin subunit beta like 1 / O95965* / Q8VDV0* / Integrin beta-like protein 1 *ENSGALG0000001686712


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR002369  Integrin beta subunit, VWA domain
 IPR015442  Integrin beta-8 subunit
 IPR015812  Integrin beta subunit
 IPR016201  PSI domain
 IPR032695  Integrin domain superfamily
 IPR033760  Integrin beta N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001573 ganglioside metabolic process IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0045766 positive regulation of angiogenesis IEA
 biological_processGO:0051216 cartilage development IEA
 cellular_componentGO:0008305 integrin complex IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034686 integrin alphav-beta8 complex IEA
 molecular_functionGO:1990430 extracellular matrix protein binding IEA


Pathways (from Reactome)
Pathway description
Molecules associated with elastic fibres
Integrin cell surface interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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