ENSGALG00000011141


Gallus gallus

Features
Gene ID: ENSGALG00000011141
  
Biological name :ITGB6
  
Synonyms : integrin subunit beta 6 / ITGB6
  
Possible biological names infered from orthology : Integrin beta-6 / P18564 / Q9Z0T9
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 21907409
Gene end: 21935081
  
Corresponding Affymetrix probe sets: GgaAffx.7076.1.S1_at (Chicken Array)   GgaAffx.7076.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018148
NCBI entrez gene - 424191     See in Manteia.
RefSeq - XM_004942825
RefSeq - XM_015289712
RefSeq - XM_015289713
RefSeq - XM_015289714
RefSeq - XM_004942824
swissprot - E1C6K8
Ensembl - ENSGALG00000011141
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 itgb6ENSDARG00000002494Danio rerio
 ITGB6ENSG00000115221Homo sapiens
 Itgb6ENSMUSG00000026971Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ITGB3 / P05106* / O54890* / AC068234.1* / Integrin beta-3 * / integrin subunit beta 3*ENSGALG0000000037947
ITGB5 / integrin beta-5 precursor / P18084* / integrin subunit beta 5*ENSGALG0000002976645
ITGB1 / integrin subunit beta 1 / P05556* / P09055* / Integrin beta-1 *ENSGALG0000000714540
ITGB2 / integrin beta-2 precursor / Itgb2l* / P05107* / Q3UV74* / integrin subunit beta 2* / Integrin beta-2-like protein *ENSGALG0000000751137
ITGB4 / integrin subunit beta 4 / A2A863* / P16144* / Integrin beta-4 *ENSGALG0000000238933
ITGB8 / integrin subunit beta 8 / P26012*ENSGALG0000001087532
ITGBL1 / integrin subunit beta like 1 / O95965* / Q8VDV0* / Integrin beta-like protein 1 *ENSGALG0000001686715


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR002369  Integrin beta subunit, VWA domain
 IPR012896  Integrin beta subunit, tail
 IPR014836  Integrin beta subunit, cytoplasmic domain
 IPR015436  Integrin beta-6 subunit
 IPR015812  Integrin beta subunit
 IPR016201  PSI domain
 IPR032695  Integrin domain superfamily
 IPR033760  Integrin beta N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 biological_processGO:0033627 cell adhesion mediated by integrin IEA
 biological_processGO:0038044 transforming growth factor-beta secretion IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0008305 integrin complex IEA
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0034685 integrin alphav-beta6 complex IEA
 cellular_componentGO:0043235 receptor complex IEA
 molecular_functionGO:0005178 integrin binding IEA


Pathways (from Reactome)
Pathway description
Elastic fibre formation
Molecules associated with elastic fibres
Integrin cell surface interactions
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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