ENSGALG00000011660


Gallus gallus

Features
Gene ID: ENSGALG00000011660
  
Biological name :WTAP
  
Synonyms : WT1 associated protein / WTAP
  
Possible biological names infered from orthology : Q15007 / Q9ER69 / Wilms tumour 1-associating protein
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 45752589
Gene end: 45772323
  
Corresponding Affymetrix probe sets: Gga.12125.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019038
Ensembl peptide - ENSGALP00000062828
NCBI entrez gene - 421588     See in Manteia.
RefSeq - XM_015284314
RefSeq - XM_015284315
RefSeq - XM_015284316
swissprot - E1BV94
swissprot - A0A1L1RVG8
Ensembl - ENSGALG00000011660
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wtapENSDARG00000042642Danio rerio
 WTAPENSG00000146457Homo sapiens
 WtapENSMUSG00000060475Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029732  WTAP/Mum2 family
 IPR033757  Pre-mRNA-splicing regulator WTAP


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0080009 mRNA methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0036396 RNA N6-methyladenosine methyltransferase complex IEA


Pathways (from Reactome)
Pathway description
Processing of Capped Intron-Containing Pre-mRNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000012000 Q5ZK35 / METTL14 / N6-adenosine-methyltransferase non-catalytic subunit / Q3UIK4* / Q9HCE5* / methyltransferase like 14*  / complex
 ENSGALG00000006843 NCBP2 / A6PVI3* / NCBP2L* / P52298* / Q9CQ49* / nuclear cap binding protein subunit 2* / nuclear cap binding protein subunit 2 like*  / reaction
 ENSGALG00000016974 GTF2F2 / general transcription factor IIF subunit 2 / P13984* / Q8R0A0* / ral transcription factor IIF subunit 2 *  / reaction
 ENSGALG00000002087 NCBP1 / Q5ZJZ6 / Nuclear cap-binding protein subunit 1 / Q09161* / Q3UYV9*  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr