ENSGALG00000013193


Gallus gallus

Features
Gene ID: ENSGALG00000013193
  
Biological name :IRX2
  
Synonyms : iroquois homeobox 2 / IRX2
  
Possible biological names infered from orthology : Iroquois-class homeodomain protein IRX-2 / P81066 / Q9BZI1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 86903336
Gene end: 86907419
  
Corresponding Affymetrix probe sets: Gga.2980.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021521
NCBI entrez gene - 373975     See in Manteia.
RefSeq - NM_001030336
RefSeq - XM_015282366
RefSeq Peptide - NP_001025507
swissprot - Q9PU52
Ensembl - ENSGALG00000013193
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 irx2aENSDARG00000001785Danio rerio
 IRX2ENSG00000170561Homo sapiens
 Irx2ENSMUSG00000001504Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IRX5 / iroquois homeobox 5 / P78411* / Q9JKQ4* / Iroquois-class homeodomain protein IRX-5 *ENSGALG0000000358829
IRX1 / iroquois-class homeodomain protein IRX-1 / P78414* / P81068* / iroquois homeobox 1*ENSGALG0000003099129
IRX4 / Q9YGS0 / Iroquois-class homeodomain protein IRX-4 / P78413* / Q9QY61* / iroquois homeobox 4*ENSGALG0000002289628
IRX3 / iroquois homeobox 3 / P78415* / P81067* / Iroquois-class homeodomain protein IRX-3 *ENSGALG0000004204526
IRX6 / iroquois homeobox 6 / P78412* / Q9ER75* / Iroquois-class homeodomain protein IRX-6 *ENSGALG0000002373821
MKX / mohawk homeobox / Q8IYA7*ENSGALG0000000742615


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003893  Iroquois-class homeodomain protein
 IPR008422  Homeobox KN domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001656 metanephros development IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0072086 specification of loop of Henle identity IEA
 biological_processGO:0072272 proximal/distal pattern formation involved in metanephric nephron development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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