ENSGALG00000022896


Gallus gallus

Features
Gene ID: ENSGALG00000022896
  
Biological name :IRX4
  
Synonyms : Iroquois-class homeodomain protein IRX-4 / IRX4 / Q9YGS0
  
Possible biological names infered from orthology : iroquois homeobox 4 / P78413 / Q9QY61
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 86323267
Gene end: 86331445
  
Corresponding Affymetrix probe sets: GgaAffx.21831.1.S1_at (Chicken Array)   GgaAffx.21831.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000036193
NCBI entrez gene - 373974     See in Manteia.
RefSeq - XM_015282324
RefSeq - NM_001001744
RefSeq - XM_015282323
RefSeq Peptide - NP_001001744
swissprot - Q9YGS0
swissprot - F1NQQ7
Ensembl - ENSGALG00000022896
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 irx4aENSDARG00000035648Danio rerio
 irx4bENSDARG00000036051Danio rerio
 IRX4ENSG00000113430Homo sapiens
 Irx4ENSMUSG00000021604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IRX3 / iroquois homeobox 3 / P78415* / P81067* / Iroquois-class homeodomain protein IRX-3 *ENSGALG0000004204527
IRX2 / iroquois homeobox 2 / P81066* / Q9BZI1* / Iroquois-class homeodomain protein IRX-2 *ENSGALG0000001319327
IRX1 / iroquois-class homeodomain protein IRX-1 / P78414* / P81068* / iroquois homeobox 1*ENSGALG0000003099126
IRX6 / iroquois homeobox 6 / P78412* / Q9ER75* / Iroquois-class homeodomain protein IRX-6 *ENSGALG0000002373824
IRX5 / iroquois homeobox 5 / P78411* / Q9JKQ4* / Iroquois-class homeodomain protein IRX-5 *ENSGALG0000000358821
MKX / mohawk homeobox / Q8IYA7*ENSGALG0000000742615


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003893  Iroquois-class homeodomain protein
 IPR008422  Homeobox KN domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007507 heart development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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