ENSDARG00000036051


Danio rerio

Features
Gene ID: ENSDARG00000036051
  
Biological name :irx4b
  
Synonyms : iroquois homeobox 4b / irx4b
  
Possible biological names infered from orthology : Iroquois-class homeodomain protein IRX-4 / iroquois homeobox 4 / IRX4 / P78413 / Q9QY61
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 28114503
Gene end: 28262897
  
Corresponding Affymetrix probe sets: Dr.18462.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000152204
Ensembl peptide - ENSDARP00000052337
Ensembl peptide - ENSDARP00000114928
Ensembl peptide - ENSDARP00000148526
Ensembl peptide - ENSDARP00000149631
NCBI entrez gene - 474318     See in Manteia.
swissprot - Q1LWG1
ZFIN ID - ZDB-GENE-040712-4
Ensembl - ENSDARG00000036051
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IRX4ENSGALG00000022896Gallus gallus
 IRX4ENSG00000113430Homo sapiens
 Irx4ENSMUSG00000021604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
irx4a / iroquois homeobox 4a / IRX4* / P78413* / Q9QY61* / iroquois homeobox 4* / Iroquois-class homeodomain protein IRX-4 *ENSDARG0000003564847
irx6a / iroquois homeobox 6a / IRX6* / P78412* / Q9ER75* / iroquois homeobox 6* / Iroquois-class homeodomain protein IRX-6 *ENSDARG0000003442034
irx3a / iroquois homeobox 3a / IRX3* / P78415* / P81067* / iroquois homeobox 3* / Iroquois-class homeodomain protein IRX-3 *ENSDARG0000010107628
irx1b / iroquois homeobox 1bENSDARG0000005659427
irx1a / iroquois homeobox 1a / IRX1* / P78414* / iroquois homeobox 1*ENSDARG0000010183127
irx5a / iroquois homeobox 5a / IRX5* / P78411* / Q9JKQ4* / iroquois homeobox 5* / Iroquois-class homeodomain protein IRX-5 *ENSDARG0000003404326
irx2a / iroquois homeobox 2a / IRX2* / P81066* / Q9BZI1* / iroquois homeobox 2* / Iroquois-class homeodomain protein IRX-2 *ENSDARG0000000178526
irx3b / iroquois homeobox 3b / IRX3* / P78415* / iroquois homeobox 3*ENSDARG0000003113824
irx5b / iroquois homeobox 5b / IRX5* / P78411* / Q9JKQ4* / iroquois homeobox 5* / Iroquois-class homeodomain protein IRX-5 *ENSDARG0000007407024
irx7 / iroquois homeobox 7ENSDARG0000000260122
mkxa / mohawk homeobox a / MKX* / Q8IYA7* / mohawk homeobox*ENSDARG0000007545015
mkxb / mohawk homeobox b / MKX* / Q8IYA7* / mohawk homeobox*ENSDARG0000011418213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003893  Iroquois-class homeodomain protein
 IPR008422  Homeobox KN domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr