ENSGALG00000015436


Gallus gallus

Features
Gene ID: ENSGALG00000015436
  
Biological name :SDCBP
  
Synonyms : SDCBP / syndecan binding protein
  
Possible biological names infered from orthology : O00560 / O08992
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 112407137
Gene end: 112419755
  
Corresponding Affymetrix probe sets: Gga.4731.2.S1_at (Chicken Array)   Gga.4731.3.S1_at (Chicken Array)   GgaAffx.13209.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024853
Ensembl peptide - ENSGALP00000064170
Ensembl peptide - ENSGALP00000051284
NCBI entrez gene - 421136     See in Manteia.
RefSeq - NM_001031024
RefSeq - XM_015282672
RefSeq Peptide - NP_001026195
swissprot - A0A1L1RZ83
swissprot - A0A1D5PES5
swissprot - Q5ZHM8
Ensembl - ENSGALG00000015436
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sdcbpENSDARG00000030097Danio rerio
 SDCBPENSG00000137575Homo sapiens
 SdcbpENSMUSG00000028249Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SDCBP2 / syndecan binding protein 2 / Q99JZ0* / Q9H190* / Syntenin-2 *ENSGALG0000002834758


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR030528  Syntenin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007265 Ras protein signal transduction IEA
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0030307 positive regulation of cell growth IEA
 biological_processGO:0030335 positive regulation of cell migration IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005895 interleukin-5 receptor complex IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0005137 interleukin-5 receptor binding IEA


Pathways (from Reactome)
Pathway description
Ephrin signaling
Neurofascin interactions
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000004741 EPHB2 / EPH receptor B2 / P29323* / P54763* / Ephrin type-B receptor 2 *  / reaction / complex
 ENSGALG00000006609 EPHB1 / EPH receptor B1 / P54762* / Q8CBF3* / Ephrin type-B receptor 1 *  / complex / reaction
 ENSGALG00000031776 NFASC / O42414 / Neurofascin / O94856* / Q810U3*  / reaction / complex
 ENSGALG00000029175 EFNB2 / ephrin B2 / P52799* / P52800*  / reaction / complex






 

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