ENSGALG00000016304


Gallus gallus

Features
Gene ID: ENSGALG00000016304
  
Biological name :LRRC1
  
Synonyms : leucine rich repeat containing 1 / LRRC1
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 1 / Q80VQ1 / Q9BTT6
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 88395313
Gene end: 88456575
  
Corresponding Affymetrix probe sets: Gga.11132.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026254
NCBI entrez gene - 421891     See in Manteia.
RefSeq - XM_015284905
RefSeq - XM_015284908
RefSeq - XM_015284906
RefSeq - XM_015284907
swissprot - F1NRK4
Ensembl - ENSGALG00000016304
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrc1ENSDARG00000102684Danio rerio
 LRRC1ENSG00000137269Homo sapiens
 Lrrc1ENSMUSG00000032352Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCRIB / scribbled planar cell polarity protein / Q14160* / Q80U72*ENSGALG0000003279052
ERBIN / erbb2 interacting protein / Q80TH2* / Q96RT1*ENSGALG0000001477342
LRRC7 / leucine rich repeat containing 7 / Q96NW7*ENSGALG0000001128440
SHOC2 / leucine-rich repeat protein SHOC-2 / O88520* / Q9UQ13* / SHOC2, leucine rich repeat scaffold protein* / Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), trans...ENSGALG0000000877126
MFHAS1 / malignant fibrous histiocytoma amplified sequence 1 / Q3V1N1* / Q9Y4C4* / Malignant fibrous histiocytoma-amplified sequence 1 homolog *ENSGALG0000001144425
LRRIQ4 / leucine rich repeats and IQ motif containing 4 / A6H6A4* / A6NIV6* / Leucine-rich repeat and IQ domain-containing protein 4 *ENSGALG0000000939723
LRRC40 / leucine-rich repeat-containing protein 40 / Q9H9A6* / leucine rich repeat containing 40* / leucine-rich repeat-containing protein 40 isoform b *ENSGALG0000001130122
ENSGALG0000004431314
LRRC10 / leucine rich repeat containing 10 / Q5BKY1* / Q8K3W2* / Leucine-rich repeat-containing protein 10 *ENSGALG0000000997613
LRRC30 / leucine rich repeat containing 30 / A6NM36*ENSGALG0000004265212
ENSGALG0000004376012


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily
 IPR032927  Erbin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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