ENSGALG00000032790


Gallus gallus

Features
Gene ID: ENSGALG00000032790
  
Biological name :SCRIB
  
Synonyms : SCRIB / scribbled planar cell polarity protein
  
Possible biological names infered from orthology : Q14160 / Q80U72
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 149349274
Gene end: 149417049
  
Corresponding Affymetrix probe sets: GgaAffx.11265.1.S1_at (Chicken Array)   GgaAffx.11265.2.S1_at (Chicken Array)   GgaAffx.25293.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048134
swissprot - A0A1D5P610
Ensembl - ENSGALG00000032790
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scribENSDARG00000000861Danio rerio
 SCRIBENSG00000180900Homo sapiens
 ScribENSMUSG00000022568Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ERBIN / erbb2 interacting protein / Q80TH2* / Q96RT1*ENSGALG0000001477321
LRRC1 / leucine rich repeat containing 1 / Q80VQ1* / Q9BTT6* / Leucine-rich repeat-containing protein 1 *ENSGALG0000001630420
LRRC7 / leucine rich repeat containing 7 / Q96NW7*ENSGALG0000001128420
MFHAS1 / malignant fibrous histiocytoma amplified sequence 1 / Q3V1N1* / Q9Y4C4* / Malignant fibrous histiocytoma-amplified sequence 1 homolog *ENSGALG0000001144411
SHOC2 / leucine-rich repeat protein SHOC-2 / O88520* / Q9UQ13* / SHOC2, leucine rich repeat scaffold protein* / Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), trans...ENSGALG000000087719
LRRIQ4 / leucine rich repeats and IQ motif containing 4 / A6H6A4* / A6NIV6* / Leucine-rich repeat and IQ domain-containing protein 4 *ENSGALG000000093979
LRRC40 / leucine-rich repeat-containing protein 40 / Q9H9A6* / leucine rich repeat containing 40* / leucine-rich repeat-containing protein 40 isoform b *ENSGALG000000113018
ENSGALG000000443135
LRRC30 / leucine rich repeat containing 30 / A6NM36*ENSGALG000000426524
LRRC10 / leucine rich repeat containing 10 / Q5BKY1* / Q8K3W2* / Leucine-rich repeat-containing protein 10 *ENSGALG000000099764
ENSGALG000000437604


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0001921 positive regulation of receptor recycling IEA
 biological_processGO:0002093 auditory receptor cell morphogenesis IEA
 biological_processGO:0008104 protein localization IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0016080 synaptic vesicle targeting IEA
 biological_processGO:0016331 morphogenesis of embryonic epithelium IEA
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0021747 cochlear nucleus development IEA
 biological_processGO:0035089 establishment of apical/basal cell polarity IEA
 biological_processGO:0042060 wound healing IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:0045930 negative regulation of mitotic cell cycle IEA
 biological_processGO:0048488 synaptic vesicle endocytosis IEA
 biological_processGO:0050918 positive chemotaxis IEA
 biological_processGO:0060088 auditory receptor cell stereocilium organization IEA
 biological_processGO:0060561 apoptotic process involved in morphogenesis IEA
 biological_processGO:0060603 mammary gland duct morphogenesis IEA
 biological_processGO:0071896 protein localization to adherens junction IEA
 biological_processGO:0090630 activation of GTPase activity IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 cellular_componentGO:0016323 basolateral plasma membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0031252 cell leading edge IEA
 cellular_componentGO:0034750 Scrib-APC-beta-catenin complex IEA
 cellular_componentGO:0035748 myelin sheath abaxonal region IEA
 cellular_componentGO:0042734 presynaptic membrane IEA
 cellular_componentGO:0044291 cell-cell contact zone IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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