ENSDARG00000102684


Danio rerio

Features
Gene ID: ENSDARG00000102684
  
Biological name :lrrc1
  
Synonyms : leucine rich repeat containing 1 / lrrc1
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 1 / Q80VQ1 / Q9BTT6
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 2254238
Gene end: 2283176
  
Corresponding Affymetrix probe sets: Dr.10955.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000138287
swissprot - A0A0G2L0N2
ZFIN ID - ZDB-GENE-050320-1
Ensembl - ENSDARG00000102684
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC1ENSGALG00000016304Gallus gallus
 LRRC1ENSG00000137269Homo sapiens
 Lrrc1ENSMUSG00000032352Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scrib / Q4H4B6 / scribbled planar cell polarity protein / Q14160* / Q80U72*ENSDARG0000000086158
lrrc7 / leucine rich repeat containing 7 / Q96NW7*ENSDARG0000007967040
erbin / erbb2 interacting protein / Q80TH2* / Q96RT1*ENSDARG0000004428137
shoc2 / Q1L8Y7 / SHOC2 leucine-rich repeat scaffold protein / O88520* / Q9UQ13* / Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), transcript variant 3, mRNA.*ENSDARG0000004085324
mfhas1 / malignant fibrous histiocytoma amplified sequence 1 / Q3V1N1* / Q9Y4C4* / Malignant fibrous histiocytoma-amplified sequence 1 homolog *ENSDARG0000007910423
lrrc40 / leucine rich repeat containing 40 / Q9H9A6* / leucine-rich repeat-containing protein 40 isoform b *ENSDARG0000001770819
ascl1b / achaete-scute family bHLH transcription factor 1bENSDARG0000000970216
lrrc10 / leucine rich repeat containing 10 / Q5BKY1* / Q8K3W2* / Leucine-rich repeat-containing protein 10 *ENSDARG0000004561214
lrrc30a / leucine rich repeat containing 30a / A6NM36* / LRRC30* / leucine rich repeat containing 30*ENSDARG0000002971010


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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