ENSDARG00000079670


Danio rerio

Features
Gene ID: ENSDARG00000079670
  
Biological name :lrrc7
  
Synonyms : leucine rich repeat containing 7 / lrrc7
  
Possible biological names infered from orthology : Q96NW7
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 30124197
Gene end: 30210378
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102300
Ensembl peptide - ENSDARP00000128032
swissprot - E7EZZ0
swissprot - X1WCT5
ZFIN ID - ZDB-GENE-130530-876
Ensembl - ENSDARG00000079670
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC7ENSGALG00000011284Gallus gallus
 LRRC7ENSG00000033122Homo sapiens
 Lrrc7ENSMUSG00000028176Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
erbin / erbb2 interacting protein / Q80TH2* / Q96RT1*ENSDARG0000004428137
scrib / Q4H4B6 / scribbled planar cell polarity protein / Q14160* / Q80U72*ENSDARG0000000086122
lrrc1 / leucine rich repeat containing 1 / Q9BTT6*ENSDARG0000010268412
mfhas1 / malignant fibrous histiocytoma amplified sequence 1 / Q3V1N1* / Q9Y4C4* / Malignant fibrous histiocytoma-amplified sequence 1 homolog *ENSDARG0000007910411
shoc2 / Q1L8Y7 / SHOC2 leucine-rich repeat scaffold protein / O88520* / Q9UQ13* / Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), transcript variant 3, mRNA.*ENSDARG0000004085310
lrrc40 / leucine rich repeat containing 40 / Q9H9A6* / leucine-rich repeat-containing protein 40 isoform b *ENSDARG000000177089
ascl1b / achaete-scute family bHLH transcription factor 1bENSDARG000000097029
lrrc10 / leucine rich repeat containing 10 / Q5BKY1* / Q8K3W2* / Leucine-rich repeat-containing protein 10 *ENSDARG000000456124
lrrc30a / leucine rich repeat containing 30a / A6NM36* / LRRC30* / leucine rich repeat containing 30*ENSDARG000000297103


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0010976 positive regulation of neuron projection development IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0043005 neuron projection IBA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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