ENSDARG00000040853


Danio rerio

Features
Gene ID: ENSDARG00000040853
  
Biological name :shoc2
  
Synonyms : Q1L8Y7 / shoc2 / SHOC2 leucine-rich repeat scaffold protein
  
Possible biological names infered from orthology : Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), transcript variant 3, mRNA. / O88520 / Q9UQ13
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 29596646
Gene end: 29640181
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000059881
NCBI entrez gene - 555476     See in Manteia.
RefSeq - NM_001044786
RefSeq Peptide - NP_001038251
swissprot - Q1L8Y7
ZFIN ID - ZDB-GENE-050208-523
Ensembl - ENSDARG00000040853
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SHOC2ENSGALG00000008771Gallus gallus
 SHOC2ENSG00000108061Homo sapiens
 Shoc2ENSMUSG00000024976Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scrib / Q4H4B6 / scribbled planar cell polarity protein / Q14160* / Q80U72*ENSDARG0000000086127
lrrc7 / leucine rich repeat containing 7 / Q96NW7*ENSDARG0000007967026
erbin / erbb2 interacting protein / Q80TH2* / Q96RT1*ENSDARG0000004428125
lrrc40 / leucine rich repeat containing 40 / Q9H9A6* / leucine-rich repeat-containing protein 40 isoform b *ENSDARG0000001770823
mfhas1 / malignant fibrous histiocytoma amplified sequence 1 / Q3V1N1* / Q9Y4C4* / Malignant fibrous histiocytoma-amplified sequence 1 homolog *ENSDARG0000007910422
lrrc1 / leucine rich repeat containing 1 / Q9BTT6*ENSDARG0000010268419
ascl1b / achaete-scute family bHLH transcription factor 1bENSDARG0000000970216
lrrc10 / leucine rich repeat containing 10 / Q5BKY1* / Q8K3W2* / Leucine-rich repeat-containing protein 10 *ENSDARG0000004561210
lrrc30a / leucine rich repeat containing 30a / A6NM36* / LRRC30* / leucine rich repeat containing 30*ENSDARG000000297107


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007265 Ras protein signal transduction IBA
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IEA
 biological_processGO:0046579 positive regulation of Ras protein signal transduction ISS
 cellular_componentGO:0000164 protein phosphatase type 1 complex IBA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0019888 protein phosphatase regulator activity IBA
 molecular_functionGO:0019903 protein phosphatase binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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