ENSG00000108061


Homo sapiens

Features
Gene ID: ENSG00000108061
  
Biological name :SHOC2
  
Synonyms : Q9UQ13 / SHOC2 / SHOC2, leucine rich repeat scaffold protein
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q25.2
Gene start: 110919547
Gene end: 111013667
  
Corresponding Affymetrix probe sets: 202777_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000265277
Ensembl peptide - ENSP00000358464
Ensembl peptide - ENSP00000408275
NCBI entrez gene - 8036     See in Manteia.
OMIM - 602775
RefSeq - XM_017016704
RefSeq - NM_001269039
RefSeq - NM_001324336
RefSeq - NM_001324337
RefSeq - NM_007373
RefSeq - XM_017016702
RefSeq - XM_017016703
RefSeq Peptide - NP_031399
RefSeq Peptide - NP_001255968
RefSeq Peptide - NP_001311265
RefSeq Peptide - NP_001311266
swissprot - Q9UQ13
swissprot - X6RI37
Ensembl - ENSG00000108061
  
Related genetic diseases (OMIM): 607721 - Noonan-like syndrome with loose anagen hair, 607721
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 shoc2ENSDARG00000040853Danio rerio
 SHOC2ENSGALG00000008771Gallus gallus
 Shoc2ENSMUSG00000024976Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCRIB / Q14160 / scribbled planar cell polarity proteinENSG0000018090027
ERBIN / Q96RT1 / erbb2 interacting proteinENSG0000011285125
LRRC7 / Q96NW7 / leucine rich repeat containing 7ENSG0000003312224
LRRD1 / A4D1F6 / leucine rich repeats and death domain containing 1ENSG0000024072023
LRRC40 / Q9H9A6 / leucine rich repeat containing 40ENSG0000006655722
LRRC1 / Q9BTT6 / leucine rich repeat containing 1ENSG0000013726922
A6NIV6 / LRRIQ4 / leucine rich repeats and IQ motif containing 4ENSG0000018830621
MFHAS1 / Q9Y4C4 / malignant fibrous histiocytoma amplified sequence 1ENSG0000014732421
A6NM36 / LRRC30 / leucine rich repeat containing 30ENSG0000020642213
A6NIK2 / LRRC10B / leucine rich repeat containing 10BENSG0000020495012
LRRC10 / Q5BKY1 / leucine rich repeat containing 10ENSG0000019881210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR026906  Leucine rich repeat 5
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007265 Ras protein signal transduction NAS
 biological_processGO:0008543 fibroblast growth factor receptor signaling pathway NAS
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IEA
 biological_processGO:0046579 positive regulation of Ras protein signal transduction IMP
 cellular_componentGO:0000164 protein phosphatase type 1 complex IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm NAS
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008157 protein phosphatase 1 binding IDA
 molecular_functionGO:0019888 protein phosphatase regulator activity TAS
 molecular_functionGO:0019903 protein phosphatase binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000174 Abnormality of palate "Any abnormality of the `palate` (FMA:54549), i.e., of roof of the mouth)." [HPO:probinson]
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 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
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 HP:0000233 Thin vermillion border 
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 HP:0000238 Hydrocephalus 
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000365 Hearing loss 
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000400 Large ears 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000465 Webbed neck 
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 HP:0000470 Short neck 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000527 Long eyelashes "Mid upper eyelash length >10 mm or increased length of the eyelashes (subjective)." [pmid:19125427]
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 HP:0000670 Carious teeth 
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 HP:0000752 Hyperactivity 
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0000964 Eczema "Eczema is a form of dermatitis. The term eczema is broadly applied to a range of persistent skin conditions and can be related to a number of underlying conditions. Manifestations of eczema can include dryness and recurring skin rashes with redness, skin edema, itching and dryness, crusting, flaking, blistering, cracking, oozing, or bleeding." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
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 HP:0001249 Mental retardation 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001388 Joint laxity 
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 HP:0001561 Polyhydramnios 
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 HP:0001611 Nasal speech 
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0001642 Pulmonic stenosis "A narrowing of the right ventricular outflow tract that can occur at the pulmonary valve (valvular stenosis) or just below the pulmonary valve (infundibular stenosis). Infundibular pulmonic stenosis is mostly caused by overgrowth of the heart muscle wall (hypertrophy of the septoparietal trabeculae). Pulmonic stenosis is often seen as a part of Fallot s tetralogy, in which case the events leading to the formation of the overriding aorta are also believed to be a cause of the pulmonic stenosis. The pulmonic stenosis is the major cause of the malformations seen in patients with Fallot tetralogy, with the other associated malformations acting as compensatory mechanisms to the pulmonic stenosis. The degree of stenosis varies between individuals with TOF, and is the primary determinant of symptoms and severity. This malformation is infrequently described as sub-pulmonary stenosis or subpulmonary obstruction." [HPO:curators]
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 HP:0001800 Hypoplastic toenails "Underdeveloped toenails." [HPO:curators]
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 HP:0002002 Deep philtrum 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002162 Low posterior hairline 
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 HP:0002209 Sparse scalp hair "Sparseness of the `head hair` (FMA:54241)." [HPO:probinson]
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005108 Abnormality of the intervertebral disks 
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 HP:0006191 Deep palmar creases "An increased depth of the palmar creases." [HPO:curators]
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0009811 Abnormality of the elbow 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0040169 Loose anagen hair 
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 HP:0100840 Aplasia/Hypoplasia of the eyebrow "Absence or underdevelopment of the eyebrow." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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