ENSG00000137269


Homo sapiens

Features
Gene ID: ENSG00000137269
  
Biological name :LRRC1
  
Synonyms : leucine rich repeat containing 1 / LRRC1 / Q9BTT6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p12.1
Gene start: 53794497
Gene end: 53924121
  
Corresponding Affymetrix probe sets: 207790_at (Human Genome U133 Plus 2.0 Array)   218816_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359919
Ensembl peptide - ENSP00000359925
Ensembl peptide - ENSP00000435217
NCBI entrez gene - 55227     See in Manteia.
OMIM - 608195
RefSeq - XM_017010997
RefSeq - NM_018214
RefSeq - XM_011514726
RefSeq - XM_011514727
RefSeq Peptide - NP_060684
swissprot - Q5T0G3
swissprot - Q9BTT6
Ensembl - ENSG00000137269
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrc1ENSDARG00000102684Danio rerio
 LRRC1ENSGALG00000016304Gallus gallus
 Lrrc1ENSMUSG00000032352Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCRIB / Q14160 / scribbled planar cell polarity proteinENSG0000018090062
LRRC7 / Q96NW7 / leucine rich repeat containing 7ENSG0000003312241
ERBIN / Q96RT1 / erbb2 interacting proteinENSG0000011285140
MFHAS1 / Q9Y4C4 / malignant fibrous histiocytoma amplified sequence 1ENSG0000014732427
SHOC2 / Q9UQ13 / SHOC2, leucine rich repeat scaffold proteinENSG0000010806124
A6NIV6 / LRRIQ4 / leucine rich repeats and IQ motif containing 4ENSG0000018830623
LRRC40 / Q9H9A6 / leucine rich repeat containing 40ENSG0000006655723
LRRD1 / A4D1F6 / leucine rich repeats and death domain containing 1ENSG0000024072021
A6NIK2 / LRRC10B / leucine rich repeat containing 10BENSG0000020495015
LRRC10 / Q5BKY1 / leucine rich repeat containing 10ENSG0000019881214
A6NM36 / LRRC30 / leucine rich repeat containing 30ENSG0000020642213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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