ENSMUSG00000032352


Mus musculus

Features
Gene ID: ENSMUSG00000032352
  
Biological name :Lrrc1
  
Synonyms : Leucine-rich repeat-containing protein 1 / Lrrc1 / Q80VQ1
  
Possible biological names infered from orthology : leucine rich repeat containing 1 / Q9BTT6
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: D
Gene start: 77430823
Gene end: 77544870
  
Corresponding Affymetrix probe sets: 10595109 (MoGene1.0st)   1452411_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000109048
Ensembl peptide - ENSMUSP00000138912
Ensembl peptide - ENSMUSP00000138934
Ensembl peptide - ENSMUSP00000139226
NCBI entrez gene - 214345     See in Manteia.
MGI - MGI:2442313
RefSeq - NM_172528
RefSeq - NM_001146048
RefSeq Peptide - NP_001139520
RefSeq Peptide - NP_766116
swissprot - V9GX13
swissprot - Q80VQ1
swissprot - G3X9W3
Ensembl - ENSMUSG00000032352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrc1ENSDARG00000102684Danio rerio
 LRRC1ENSGALG00000016304Gallus gallus
 LRRC1ENSG00000137269Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Scrib / Q80U72 / scribbled planar cell polarity protein / Q14160*ENSMUSG0000002256862
Lrrc7 / leucine rich repeat containing 7 / Q96NW7*ENSMUSG0000002817641
Erbin / Q80TH2 / Q96RT1* / erbb2 interacting protein*ENSMUSG0000002170940
Mfhas1 / Q3V1N1 / Malignant fibrous histiocytoma-amplified sequence 1 homolog / Q9Y4C4* / malignant fibrous histiocytoma amplified sequence 1*ENSMUSG0000007005627
Shoc2 / O88520 / Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), transcript variant 3, mRNA. / Q9UQ13* / SHOC2, leucine rich repeat scaffold protein*ENSMUSG0000002497624
A6H6A4 / Lrriq4 / Leucine-rich repeat and IQ domain-containing protein 4 / A6NIV6* / leucine rich repeats and IQ motif containing 4*ENSMUSG0000002770323
Lrrc40 / leucine-rich repeat-containing protein 40 isoform b / Q9H9A6* / leucine rich repeat containing 40*ENSMUSG0000006305222
Lrrd1 / Q8C0R9 / Leucine-rich repeat and death domain-containing protein 1 / A4D1F6* / leucine rich repeats and death domain containing 1*ENSMUSG0000004036722
Lrrc10b / leucine rich repeat containing 10B / A6NIK2*ENSMUSG0000009029116
Lrrc10 / Q8K3W2 / Leucine-rich repeat-containing protein 10 / Q5BKY1* / leucine rich repeat containing 10*ENSMUSG0000006018713
Lrrc30 / leucine rich repeat containing 30 / A6NM36*ENSMUSG0000007337512


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr