ENSG00000066557


Homo sapiens

Features
Gene ID: ENSG00000066557
  
Biological name :LRRC40
  
Synonyms : leucine rich repeat containing 40 / LRRC40 / Q9H9A6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p31.1
Gene start: 70144805
Gene end: 70205620
  
Corresponding Affymetrix probe sets: 215063_x_at (Human Genome U133 Plus 2.0 Array)   218577_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359990
NCBI entrez gene - 55631     See in Manteia.
RefSeq - XM_017001696
RefSeq - NM_017768
RefSeq - XM_005271013
RefSeq - XM_011541763
RefSeq - XM_017001695
RefSeq Peptide - NP_060238
swissprot - Q9H9A6
swissprot - A0A140VJN3
Ensembl - ENSG00000066557
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrc40ENSDARG00000017708Danio rerio
 LRRC40ENSGALG00000011301Gallus gallus
 Lrrc40ENSMUSG00000063052Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRD1 / A4D1F6 / leucine rich repeats and death domain containing 1ENSG0000024072025
MFHAS1 / Q9Y4C4 / malignant fibrous histiocytoma amplified sequence 1ENSG0000014732423
A6NIV6 / LRRIQ4 / leucine rich repeats and IQ motif containing 4ENSG0000018830622
LRRC7 / Q96NW7 / leucine rich repeat containing 7ENSG0000003312222
ERBIN / Q96RT1 / erbb2 interacting proteinENSG0000011285122
SHOC2 / Q9UQ13 / SHOC2, leucine rich repeat scaffold proteinENSG0000010806121
SCRIB / Q14160 / scribbled planar cell polarity proteinENSG0000018090021
LRRC1 / Q9BTT6 / leucine rich repeat containing 1ENSG0000013726920
A6NM36 / LRRC30 / leucine rich repeat containing 30ENSG0000020642216
LRRC10 / Q5BKY1 / leucine rich repeat containing 10ENSG0000019881210
A6NIK2 / LRRC10B / leucine rich repeat containing 10BENSG000002049509


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR025875  Leucine rich repeat 4
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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