ENSGALG00000016774


Gallus gallus

Features
Gene ID: ENSGALG00000016774
  
Biological name :NPAS2
  
Synonyms : neuronal PAS domain-containing protein 2 / NPAS2
  
Possible biological names infered from orthology : neuronal PAS domain protein 2 / Q99743
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 133370840
Gene end: 133430784
  
Corresponding Affymetrix probe sets: Gga.235.1.S1_at (Chicken Array)   GgaAffx.10740.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000035797
Ensembl peptide - ENSGALP00000054494
NCBI entrez gene - 395433     See in Manteia.
RefSeq - XM_015277685
RefSeq - XM_015277682
RefSeq - XM_015277683
RefSeq - XM_015277684
RefSeq - NM_001030542
RefSeq - XM_015277677
RefSeq - XM_015277678
RefSeq - XM_015277679
RefSeq - XM_015277680
RefSeq - XM_015277681
RefSeq Peptide - NP_001025713
swissprot - E1BZV0
swissprot - A0A1D5PNQ1
Ensembl - ENSGALG00000016774
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NPAS2ENSG00000170485Homo sapiens
 Npas2ENSMUSG00000026077Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLOCK / circadian locomoter output cycles protein kaput isoform 1 / O08785* / O15516* / clock circadian regulator* / Circadian locomoter output cycles protein kaput *ENSGALG0000001379351
ENSGALG0000000906346
ARNT / aryl hydrocarbon receptor nuclear translocator / P27540* / P53762*ENSGALG0000000075119
ARNT2 / aryl hydrocarbon receptor nuclear translocator 2 / Q61324* / Q9HBZ2*ENSGALG0000000644517
ARNTL2 / aryl hydrocarbon receptor nuclear translocator-like protein 2 / Q2VPD4* / Q8WYA1* / aryl hydrocarbon receptor nuclear translocator like 2*ENSGALG0000001409616
ARNTL / Q9I8T7 / Aryl hydrocarbon receptor nuclear translocator-like protein 1 / Q9WTL8* / O00327* / aryl hydrocarbon receptor nuclear translocator like* / Mus musculus aryl hydrocarbon re...ENSGALG0000000537816
EPAS1 / endothelial PAS domain protein 1 / P97481* / Q99814* / Endothelial PAS domain-containing protein 1 *ENSGALG0000001000514
HIF1A / hypoxia-inducible factor 1-alpha / Q16665* / Q61221* / hypoxia inducible factor 1 alpha subunit*ENSGALG0000001187014
SIM2 / single-minded family bHLH transcription factor 2 / Q14190* / Q61079* / Single-minded homolog 2 *ENSGALG0000001604413
SIM1 / single-minded family bHLH transcription factor 1 / P81133* / Q61045* / Single-minded homolog 1 *ENSGALG0000001546613
NPAS3 / neuronal PAS domain protein 3 / Q8IXF0*ENSGALG0000002902212


Protein motifs (from Interpro)
Interpro ID Name
 IPR000014  PAS domain
 IPR001067  Nuclear translocator
 IPR001610  PAC motif
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR013767  PAS fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045739 positive regulation of DNA repair IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051775 response to redox state IEA
 biological_processGO:0060548 negative regulation of cell death IEA
 biological_processGO:2001020 regulation of response to DNA damage stimulus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA
 molecular_functionGO:0051879 Hsp90 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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