ENSGALG00000014096


Gallus gallus

Features
Gene ID: ENSGALG00000014096
  
Biological name :ARNTL2
  
Synonyms : ARNTL2 / aryl hydrocarbon receptor nuclear translocator-like protein 2
  
Possible biological names infered from orthology : aryl hydrocarbon receptor nuclear translocator like 2 / Q2VPD4 / Q8WYA1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 68192301
Gene end: 68228416
  
Corresponding Affymetrix probe sets: Gga.2818.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022780
NCBI entrez gene - 373925     See in Manteia.
RefSeq - XM_015289880
RefSeq - NM_204133
RefSeq - XM_015289868
RefSeq - XM_015289873
RefSeq - XM_015289844
RefSeq - XM_015289853
RefSeq - XM_015289857
RefSeq - XM_015289859
RefSeq - XM_015289865
RefSeq Peptide - NP_989464
swissprot - E1C1C5
Ensembl - ENSGALG00000014096
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arntl2ENSDARG00000041381Danio rerio
 ARNTL2ENSG00000029153Homo sapiens
 Arntl2ENSMUSG00000040187Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARNTL / Q9I8T7 / Aryl hydrocarbon receptor nuclear translocator-like protein 1 / Q9WTL8* / O00327* / aryl hydrocarbon receptor nuclear translocator like* / Mus musculus aryl hydrocarbon re...ENSGALG0000000537853
ARNT / aryl hydrocarbon receptor nuclear translocator / P27540* / P53762*ENSGALG0000000075131
ARNT2 / aryl hydrocarbon receptor nuclear translocator 2 / Q61324* / Q9HBZ2*ENSGALG0000000644530
CLOCK / circadian locomoter output cycles protein kaput isoform 1 / O08785* / O15516* / clock circadian regulator* / Circadian locomoter output cycles protein kaput *ENSGALG0000001379322
NPAS2 / neuronal PAS domain-containing protein 2 / Q99743* / neuronal PAS domain protein 2*ENSGALG0000001677421
EPAS1 / endothelial PAS domain protein 1 / P97481* / Q99814* / Endothelial PAS domain-containing protein 1 *ENSGALG0000001000519
ENSGALG0000000906318
HIF1A / hypoxia-inducible factor 1-alpha / Q16665* / Q61221* / hypoxia inducible factor 1 alpha subunit*ENSGALG0000001187018
SIM1 / single-minded family bHLH transcription factor 1 / P81133* / Q61045* / Single-minded homolog 1 *ENSGALG0000001546617
SIM2 / single-minded family bHLH transcription factor 2 / Q14190* / Q61079* / Single-minded homolog 2 *ENSGALG0000001604417
NPAS3 / neuronal PAS domain protein 3 / Q8IXF0*ENSGALG0000002902217


Protein motifs (from Interpro)
Interpro ID Name
 IPR000014  PAS domain
 IPR001067  Nuclear translocator
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR013767  PAS fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007623 circadian rhythm IEA
 biological_processGO:0042753 positive regulation of circadian rhythm IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000982 transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA
 molecular_functionGO:0070888 E-box binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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