ENSGALG00000006445


Gallus gallus

Features
Gene ID: ENSGALG00000006445
  
Biological name :ARNT2
  
Synonyms : ARNT2 / aryl hydrocarbon receptor nuclear translocator 2
  
Possible biological names infered from orthology : Q61324 / Q9HBZ2
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 12413427
Gene end: 12483133
  
Corresponding Affymetrix probe sets: Gga.1647.1.S1_at (Chicken Array)   GgaAffx.4000.1.S1_at (Chicken Array)   GgaAffx.4000.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010386
Ensembl peptide - ENSGALP00000053221
Ensembl peptide - ENSGALP00000052707
NCBI entrez gene - 415481     See in Manteia.
RefSeq - XM_413854
RefSeq - XM_015292041
RefSeq - XM_015292042
RefSeq - XM_015292043
RefSeq - XM_004943837
RefSeq - XM_015292040
swissprot - A0A1D5PK67
swissprot - A0A1D5PIS1
swissprot - E1BS64
Ensembl - ENSGALG00000006445
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arnt2ENSDARG00000103697Danio rerio
 ARNT2ENSG00000172379Homo sapiens
 Arnt2ENSMUSG00000015709Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARNT / aryl hydrocarbon receptor nuclear translocator / P27540* / P53762*ENSGALG0000000075164
ARNTL / Q9I8T7 / Aryl hydrocarbon receptor nuclear translocator-like protein 1 / Q9WTL8* / O00327* / aryl hydrocarbon receptor nuclear translocator like* / Mus musculus aryl hydrocarbon re...ENSGALG0000000537828
ARNTL2 / aryl hydrocarbon receptor nuclear translocator-like protein 2 / Q2VPD4* / Q8WYA1* / aryl hydrocarbon receptor nuclear translocator like 2*ENSGALG0000001409628
CLOCK / circadian locomoter output cycles protein kaput isoform 1 / O08785* / O15516* / clock circadian regulator* / Circadian locomoter output cycles protein kaput *ENSGALG0000001379321
NPAS2 / neuronal PAS domain-containing protein 2 / Q99743* / neuronal PAS domain protein 2*ENSGALG0000001677420
EPAS1 / endothelial PAS domain protein 1 / P97481* / Q99814* / Endothelial PAS domain-containing protein 1 *ENSGALG0000001000518
HIF1A / hypoxia-inducible factor 1-alpha / Q16665* / Q61221* / hypoxia inducible factor 1 alpha subunit*ENSGALG0000001187017
NPAS3 / neuronal PAS domain protein 3 / Q8IXF0*ENSGALG0000002902217
ENSGALG0000000906317
SIM1 / single-minded family bHLH transcription factor 1 / P81133* / Q61045* / Single-minded homolog 1 *ENSGALG0000001546616
SIM2 / single-minded family bHLH transcription factor 2 / Q14190* / Q61079* / Single-minded homolog 2 *ENSGALG0000001604415


Protein motifs (from Interpro)
Interpro ID Name
 IPR000014  PAS domain
 IPR001067  Nuclear translocator
 IPR001610  PAC motif
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR013767  PAS fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0009410 response to xenobiotic stimulus IDA
 biological_processGO:0014070 response to organic cyclic compound IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0034751 aryl hydrocarbon receptor complex IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0017162 aryl hydrocarbon receptor binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA
 molecular_functionGO:0070491 repressing transcription factor binding IPI


Pathways (from Reactome)
Pathway description
Phase I - Functionalization of compounds
Endogenous sterols
Xenobiotics
Aryl hydrocarbon receptor signalling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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