ENSGALG00000017166


Gallus gallus

Features
Gene ID: ENSGALG00000017166
  
Biological name :RAB39A
  
Synonyms : RAB39A / RAB39A, member RAS oncogene family
  
Possible biological names infered from orthology : Q14964 / Q8BHD0 / Rab39 / RAB39, member RAS oncogene family
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 180427571
Gene end: 180437150
  
Corresponding Affymetrix probe sets: GgaAffx.11003.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027673
NCBI entrez gene - 101748614     See in Manteia.
RefSeq - XM_015279539
swissprot - F1P0F8
Ensembl - ENSGALG00000017166
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q14964ENSG00000179331Homo sapiens
 Rab39ENSMUSG00000055069Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB39B / RAB39B, member RAS oncogene family / Q8BHC1* / Q96DA2*ENSGALG0000004078480
RAB42* / Q0PD08* / Q8N4Z0* / Ras-related protein Rab-42 * / RAB42, member RAS oncogene family*ENSGALG0000000099453
RAB2A / Q90965 / Ras-related protein Rab-2A / P61019* / P53994* / RAB2A, member RAS oncogene family*ENSGALG0000001545044
RAB11B / ras-related protein Rab-11B ENSGALG0000000061339
Q5ZJN2 / RAB11A / Ras-related protein Rab-11A / P62491* / P62492* / RAB11A, member RAS oncogene family*ENSGALG0000000761539
RAB4A / RAB4A, member RAS oncogene family / P20338* / P56371* / Ras-related protein Rab-4A *ENSGALG0000003621839
RAB14 / Q5ZKU5 / Ras-related protein Rab-14 / Q91V41* / P61106* / RAB14, member RAS oncogene family*ENSGALG0000000147439
RAB25* / P57735* / Q9WTL2* / RAB25, member RAS oncogene family*ENSGALG0000002981238
RAB11B / RAB11B, member RAS oncogene family / P46638* / Q15907*ENSGALG0000003780235
RAB18 / Q5ZLG1 / Ras-related protein Rab-18 / Q9NP72* / P35293* / RAB18, member RAS oncogene family*ENSGALG0000000743534
ENSGALG0000004043422


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0090383 phagosome acidification IEA
 biological_processGO:0090385 phagosome-lysosome fusion IEA
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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