ENSGALG00000036218


Gallus gallus

Features
Gene ID: ENSGALG00000036218
  
Biological name :RAB4A
  
Synonyms : RAB4A / RAB4A, member RAS oncogene family
  
Possible biological names infered from orthology : P20338 / P56371 / Ras-related protein Rab-4A
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 40094828
Gene end: 40112584
  
Corresponding Affymetrix probe sets: Gga.17618.1.S1_at (Chicken Array)   GgaAffx.20245.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044805
NCBI entrez gene - 421532     See in Manteia.
RefSeq - XM_004935486
RefSeq - XM_419573
swissprot - A0A1D5NWR3
Ensembl - ENSGALG00000036218
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab4aENSDARG00000019144Danio rerio
 RAB4AENSG00000168118Homo sapiens
 Rab4aENSMUSG00000019478Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB14 / Q5ZKU5 / Ras-related protein Rab-14 / Q91V41* / P61106* / RAB14, member RAS oncogene family*ENSGALG0000000147458
RAB2A / Q90965 / Ras-related protein Rab-2A / P61019* / P53994* / RAB2A, member RAS oncogene family*ENSGALG0000001545051
RAB11B / ras-related protein Rab-11B ENSGALG0000000061344
Q5ZJN2 / RAB11A / Ras-related protein Rab-11A / P62491* / P62492* / RAB11A, member RAS oncogene family*ENSGALG0000000761542
RAB25* / P57735* / Q9WTL2* / RAB25, member RAS oncogene family*ENSGALG0000002981242
RAB39A / RAB39A, member RAS oncogene family / Rab39* / Q8BHD0* / Q14964* / RAB39, member RAS oncogene family*ENSGALG0000001716639
RAB11B / RAB11B, member RAS oncogene family / P46638* / Q15907*ENSGALG0000003780239
RAB39B / RAB39B, member RAS oncogene family / Q8BHC1* / Q96DA2*ENSGALG0000004078437
RAB18 / Q5ZLG1 / Ras-related protein Rab-18 / Q9NP72* / P35293* / RAB18, member RAS oncogene family*ENSGALG0000000743536
RAB42* / Q0PD08* / Q8N4Z0* / Ras-related protein Rab-42 * / RAB42, member RAS oncogene family*ENSGALG0000000099435
ENSGALG0000004043425


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0019882 antigen processing and presentation IEA
 biological_processGO:0030100 regulation of endocytosis IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0070062 extracellular exosome IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0008565 protein transporter activity IEA
 molecular_functionGO:0019003 GDP binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of PIPs at the plasma membrane
TBC/RABGAPs
MET receptor recycling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001474 RAB14 / Q5ZKU5 / Ras-related protein Rab-14 / Q91V41* / P61106* / RAB14, member RAS oncogene family*  / reaction / complex
 ENSGALG00000011272 RAB5A / RAB5A, member RAS oncogene family / P20339* / Q9CQD1* / Ras-related protein Rab-5A *  / complex / reaction






 

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