ENSGALG00000021135


Gallus gallus

Features
Gene ID: ENSGALG00000021135
  
Biological name :HAPLN3
  
Synonyms : HAPLN3 / hyaluronan and proteoglycan link protein 3
  
Possible biological names infered from orthology : Q80WM5 / Q96S86
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 13042626
Gene end: 13046863
  
Corresponding Affymetrix probe sets: GgaAffx.5250.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000033373
Ensembl peptide - ENSGALP00000054544
NCBI entrez gene - 415495     See in Manteia.
RefSeq - XM_413868
swissprot - E1BUN0
Ensembl - ENSGALG00000021135
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hapln3ENSDARG00000045802Danio rerio
 HAPLN3ENSG00000140511Homo sapiens
 Hapln3ENSMUSG00000030606Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HAPLN1 / P07354 / Hyaluronan and proteoglycan link protein 1 / P10915* / Q9QUP5*ENSGALG0000001562748
HAPLN4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSGALG0000002656344
HAPLN2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSGALG0000001323443
NCAN / neurocan core protein precursor / O14594* / neurocan*ENSGALG0000003648437
BCAN / brevican / Q61361* / Q96GW7* / Brevican core protein *ENSGALG0000004546935
ACAN / Q61282* / aggrecan* / Aggrecan core protein *ENSGALG0000000672535
VCAN / versican core protein precursor / P13611* / versican*ENSGALG0000001562434
STAB1 / stabilin 1 / Q9NY15*ENSGALG0000004367216
TNFAIP6 / TNF alpha induced protein 6 / O08859* / P98066* / tumor necrosis factor alpha induced protein 6*ENSGALG0000001248114
ENSGALG000000298246
ENSGALG000000413600
ENSGALG000000392450


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IBA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007417 central nervous system development IBA
 molecular_functionGO:0005201 extracellular matrix structural constituent IBA
 molecular_functionGO:0005540 hyaluronic acid binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr